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IE-0

Euk-Vir

Choristoneura_rosaceana_nucleopolyhedrovirus

IE-0__YP_008378369__Choristoneura_rosaceana_nucleopolyhedrovirus__58094

Identity

Accession:
YP_008378369 ↗
Protein ID:
IE-0
Kingdom:
euk

Quality

80.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Choristoneura_rosaceana_nucleopolyhedrovirus

TaxID: 58094

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-181
PDB
Domain cluster: rep: ie-0__YP_009186708__Sucra_jujuba_nucleopolyhedrovirus__1563660__D21-191
D2 medium residues 186-240
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05290.18 best Baculo_IE-1 70.0 3.00e-19 100.0% 38.3%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7yuiB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.82 72.0 6.17e-01 100.0% 69.3%
7v8fB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.79 69.0 5.79e-01 98.2% 77.2%
3nw0A03 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.79 63.0 6.25e-01 96.4% 84.5%
1pzwA00 3.40.1800.20 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › 0.78 53.0 4.72e-01 72.7% 83.7%
2ds5A00 6.20.220.10 Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain 0.74 50.0 5.52e-01 74.5% 90.7%
5feyA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.73 65.0 5.75e-01 100.0% 69.2%
3l11A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.73 63.0 5.11e-01 100.0% 51.0%
3t7lA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.72 50.0 4.53e-01 72.7% 59.5%
5eyaF00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.70 61.0 5.52e-01 100.0% 72.4%
1jm7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.70 60.0 4.96e-01 100.0% 53.4%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.63 46.0 4.64e-01 78.2% 85.5%
3j7aZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.59 48.0 4.44e-01 92.7% 91.7%
2vp7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 47.0 4.45e-01 92.7% 89.4%
2xb1A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 47.0 4.03e-01 100.0% 76.0%
4jcjB01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.56 46.0 4.39e-01 96.4% 86.2%
1vd4A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 38.0 3.75e-01 76.4% 71.0%
4qf3A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 43.0 4.30e-01 96.4% 89.5%
4l68A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 38.0 3.17e-01 80.0% 89.1%
1pgjA03 1.20.5.320 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3 0.53 25.0 3.12e-01 83.6% 73.5%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3826090 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.85 76.0 6.56e-01 100.0% 71.8%
3215558 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 73.0 4.94e-01 100.0% 31.6%
3214278 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 73.0 5.22e-01 100.0% 38.3%
3914628 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.79 69.0 5.95e-01 96.4% 64.7%
3907181 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.79 72.0 5.92e-01 100.0% 64.2%
3598442 376.1.1.78 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zf_2nd_IFT121 0.79 59.0 6.37e-01 94.5% 100.0%
3217012 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.79 72.0 5.00e-01 100.0% 36.4%
3612559 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.78 68.0 5.24e-01 100.0% 49.6%
3924623 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.78 63.0 6.36e-01 94.5% 90.9%
4246607 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.78 70.0 6.00e-01 100.0% 70.6%
3457707 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.77 70.0 5.99e-01 100.0% 65.9%
3309565 376.1.3.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE 0.77 56.0 4.88e-01 76.4% 70.0%
3759745 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.77 69.0 5.83e-01 100.0% 63.3%
3537099 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.77 69.0 5.53e-01 100.0% 76.2%
3601028 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 65.0 6.40e-01 98.2% 90.0%
3620819 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 63.0 6.20e-01 94.5% 100.0%
3244935 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.77 67.0 5.59e-01 98.2% 65.3%
3268019 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.76 65.0 6.24e-01 98.2% 86.2%
3331407 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.76 61.0 5.85e-01 98.2% 76.9%
3927096 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 65.0 5.79e-01 100.0% 67.5%
4011222 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 64.0 6.33e-01 100.0% 91.7%
3233807 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 62.0 5.80e-01 96.4% 80.0%
3224677 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.75 59.0 5.82e-01 94.5% 81.7%
4945028 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 63.0 5.81e-01 100.0% 73.0%
3533740 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.74 66.0 5.91e-01 100.0% 72.0%
3751810 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 64.0 4.97e-01 100.0% 60.0%
3367616 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 63.0 5.06e-01 100.0% 60.9%
3260871 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.74 63.0 5.55e-01 100.0% 70.6%
3344003 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.74 61.0 5.42e-01 98.2% 63.7%
3631912 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 63.0 5.07e-01 100.0% 67.3%
3231111 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.74 65.0 5.62e-01 98.2% 65.9%
3181845 376.1.1.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.74 55.0 5.75e-01 96.4% 88.0%
3230227 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.74 65.0 5.35e-01 100.0% 68.0%
3230468 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 65.0 6.11e-01 100.0% 80.9%
3522971 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.74 62.0 6.27e-01 100.0% 96.4%
3636674 376.1.1.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.73 57.0 5.95e-01 100.0% 93.9%
3858618 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.73 64.0 5.69e-01 100.0% 73.8%
3743358 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.73 63.0 6.15e-01 98.2% 90.0%
3181604 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.73 60.0 5.04e-01 92.7% 71.6%
3717622 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.73 59.0 4.99e-01 94.5% 54.4%
3892822 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.73 65.0 5.80e-01 98.2% 74.7%
3402788 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.73 64.0 5.57e-01 100.0% 67.1%
3467876 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 60.0 5.08e-01 98.2% 60.0%
3638393 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.72 61.0 5.56e-01 100.0% 72.0%
3221156 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.72 61.0 6.12e-01 100.0% 96.4%
4946420 376.1.1.180 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII 0.72 61.0 5.83e-01 100.0% 83.1%
3244152 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.72 63.0 5.56e-01 100.0% 67.5%
3734051 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 53.0 5.75e-01 98.2% 100.0%
3203296 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.71 59.0 5.46e-01 100.0% 72.0%
3583761 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.71 53.0 5.61e-01 83.6% 100.0%
4991688 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.71 57.0 5.79e-01 100.0% 92.5%
4976747 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.70 60.0 3.82e-01 100.0% 24.1%
4977347 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 60.0 5.27e-01 100.0% 92.9%
4970980 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.70 59.0 5.71e-01 98.2% 90.5%
3614226 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.70 60.0 5.72e-01 100.0% 98.5%
3332901 376.1.1.12 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING-like 0.70 58.0 5.80e-01 96.4% 94.5%
5071881 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.69 59.0 5.77e-01 100.0% 91.7%
3712859 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.69 48.0 5.22e-01 72.7% 100.0%
2392556 376.1.1.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ 0.69 54.0 5.41e-01 100.0% 84.2%
3787867 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.69 58.0 4.52e-01 100.0% 57.7%
4997635 376.1.1.182 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_ribbon_3 0.68 58.0 5.22e-01 100.0% 91.3%
3299584 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 53.0 5.47e-01 100.0% 94.0%
3465532 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 56.0 5.23e-01 94.5% 91.4%
4999356 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.68 56.0 5.24e-01 96.4% 100.0%
5076810 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.68 57.0 5.57e-01 100.0% 87.3%
3648747 376.1.3.62 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_Oberon 0.68 56.0 5.07e-01 98.2% 85.0%
3317760 376.1.1.18 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-ANAPC11 0.67 55.0 5.76e-01 92.7% 100.0%
5007944 377.1.1.126 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH 0.67 45.0 5.05e-01 85.5% 97.5%
3700533 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 58.0 3.73e-01 100.0% 20.4%
3242125 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.66 57.0 3.71e-01 100.0% 22.4%
3473891 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.66 53.0 5.12e-01 94.5% 98.5%
3684718 376.1.1.11 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › COPI_C 0.66 50.0 5.04e-01 100.0% 87.3%
5076504 376.1.1.183 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Prok-RING_1 0.64 45.0 4.65e-01 81.8% 86.0%
3417508 376.1.3.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.63 48.0 5.04e-01 85.5% 100.0%
3223233 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.62 44.0 2.93e-01 76.4% 19.1%
3550392 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 3.12e-01 78.2% 24.3%
3167912 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 43.0 4.56e-01 74.5% 93.3%
3430608 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 42.0 4.11e-01 72.7% 66.7%
None — 0.60 42.0 3.00e-01 76.4% 23.8%
3627228 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 42.0 4.36e-01 76.4% 88.0%
3394822 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.60 43.0 2.99e-01 78.2% 23.1%
3581420 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 40.0 4.29e-01 72.7% 86.7%
3395303 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.57 45.0 4.14e-01 90.9% 73.3%
4015811 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.56 46.0 4.64e-01 94.5% 100.0%
3547416 376.1.3.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 0.55 41.0 4.16e-01 94.5% 83.6%
3831215 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.55 45.0 4.55e-01 94.5% 98.2%
3509625 376.1.1.32 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var 0.54 45.0 3.81e-01 98.2% 56.0%
3292736 376.1.3.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.54 44.0 4.30e-01 92.7% 88.3%