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IE-1

Euk-Vir

Plodia_interpunctella_granulovirus

IE-1__YP_009330138__Plodia_interpunctella_granulovirus__262175

Identity

Accession:
YP_009330138 ↗
Protein ID:
IE-1
Kingdom:
euk

Quality

72.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Plodia_interpunctella_granulovirus

TaxID: 262175

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 62-179
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6w72A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 39.0 3.76e-01 72.9% 89.3%
5dm6S01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.54 30.0 3.43e-01 78.8% 72.1%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2452648 221.2.1.1 ↗ a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N 0.60 32.0 3.60e-01 78.0% 64.8%
3844912 304.110.1.3 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Prp3_C 0.59 44.0 4.01e-01 78.8% 86.3%
3263228 304.110.1.3 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Prp3_C 0.56 40.0 4.00e-01 74.6% 92.8%
1108022 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.56 31.0 3.47e-01 76.3% 70.5%
3253514 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.56 33.0 3.58e-01 76.3% 69.0%
3513333 304.110.1.3 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Prp3_C 0.55 40.0 3.88e-01 76.3% 97.8%
4052507 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.55 32.0 3.52e-01 77.1% 69.5%
4145938 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.55 32.0 3.45e-01 76.3% 66.0%
4128879 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.55 33.0 3.54e-01 74.6% 70.5%
3942401 304.110.1.2 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › BLUF 0.55 42.0 3.97e-01 83.1% 97.2%
4285300 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.50e-01 76.3% 70.5%
4161236 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.53e-01 76.3% 73.3%
3510186 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.44e-01 76.3% 68.4%
4265687 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.48e-01 76.3% 70.5%
4618294 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.45e-01 76.3% 69.5%
4197939 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.45e-01 76.3% 69.5%
4209479 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 32.0 3.40e-01 74.6% 66.0%
4324086 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 31.0 3.41e-01 78.0% 68.4%
4668753 239.1.1.3 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.53 31.0 3.37e-01 76.3% 68.0%
5035233 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.50 37.0 3.42e-01 78.8% 98.1%
D2 medium residues 227-302
PDB
D3 medium residues 303-433
PDB
Domain cluster: rep: ie-1__YP_009505949__Clostera_anastomosis_granulovirus_B__1986290__D351-415_427-461
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03430.21 best TATR 30.3 3.20e-07 92.4% 14.7%