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IE-1

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

IE-1__YP_009552572__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

Accession:: YP_009552572 ↗
Protein ID:: IE-1
Kingdom:: euk

Quality

62.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 88-214

PDB

Domain cluster: rep: IE-1__YP_009330138__Plodia_interpunctella_granulovirus__262175__D62-179

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03430.21 best	TATR	88.9	5.10e-25	100.0%	30.5%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1x0gA00	2.60.300.12	Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain	0.59	30.0	3.31e-01	81.9%	59.8%
2apnA01	2.60.300.12	Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain	0.57	31.0	3.55e-01	82.7%	68.8%
2ghfA01	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.57	30.0	3.53e-01	81.9%	70.8%
1c9fA00	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.56	36.0	4.16e-01	73.2%	93.1%
4d2kB00	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.53	33.0	4.06e-01	72.4%	100.0%
1bh5A00	3.10.180.10	Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1	0.53	31.0	2.85e-01	72.4%	41.2%
1ltzA00	1.10.800.10	Mainly Alpha › Orthogonal Bundle › Phenylalanine Hydroxylase › Aromatic amino acid hydroxylase	0.51	41.0	3.27e-01	87.4%	62.4%
1r94A00	2.60.300.12	Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain	0.50	30.0	3.33e-01	83.5%	74.2%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4951018	80.1.1.0 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain	0.68	30.0	4.01e-01	75.6%	76.8%
5020085	80.1.1.0 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain	0.66	30.0	3.87e-01	75.6%	73.3%
3462989	80.1.1.1 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn	0.61	31.0	4.04e-01	79.5%	88.6%
3723396	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.58	37.0	4.50e-01	74.0%	100.0%
3271031	80.1.1.1 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn	0.57	34.0	3.66e-01	85.0%	67.9%
6182	221.1.1.10 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N	0.56	36.0	4.16e-01	73.2%	93.1%
159214	80.1.1.1 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn	0.56	32.0	3.44e-01	87.4%	63.2%
4092211	80.1.1.0 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain	0.56	32.0	3.55e-01	84.3%	71.6%
3577043	226.1.1.1 ↗	a+b two layers › POZ domain › POZ domain › POZ domain › BTB	0.55	34.0	3.28e-01	70.1%	51.3%
3669771	80.1.1.1 ↗	beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn	0.55	33.0	3.51e-01	87.4%	67.9%
1556850	221.1.1.10 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CIDE-N	0.53	34.0	4.06e-01	73.2%	100.0%
3754085	221.1.1.4 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1	0.51	35.0	3.83e-01	70.1%	98.1%
4027125	221.4.1.1 ↗	a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX	0.51	40.0	3.65e-01	82.7%	100.0%

D2 high residues 273-305_322-485

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03430.21 best	TATR	152.8	2.10e-44	90.4%	44.9%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1j4xA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.59	30.0	3.13e-01	82.2%	50.0%
1v7wA02	2.60.420.10	Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3	0.57	21.0	3.20e-01	93.9%	77.4%
1u5kA01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.57	19.0	2.88e-01	72.1%	68.3%
1dwoA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.53	38.0	3.44e-01	71.6%	100.0%
2i5bA00	3.40.1190.20	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase	0.53	41.0	3.77e-01	83.2%	89.6%
3fcyA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.52	40.0	3.48e-01	81.7%	82.3%
2l72A00	3.40.20.10	Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin	0.51	30.0	3.69e-01	79.2%	93.2%
1tluA00	3.60.90.10	Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase	0.51	26.0	3.34e-01	70.1%	82.1%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2419913	219.1.1.66 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ElaD-SseL-like_C	0.61	43.0	4.62e-01	72.1%	83.2%
3965422	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.61	25.0	3.52e-01	73.1%	76.8%
2570277	5104.1.1.0 ↗	a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases	0.59	37.0	4.34e-01	83.2%	92.4%
4435772	5104.1.1.0 ↗	a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases	0.59	36.0	4.42e-01	83.2%	96.7%
4948758	2.1.1.15 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon	0.58	20.0	3.24e-01	72.1%	82.9%
3166657	2484.3.1.3 ↗	mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › FACT-Spt16_Nlob	0.55	33.0	3.54e-01	81.7%	66.3%
3209694	330.1.1.0 ↗	a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like	0.54	26.0	3.40e-01	72.6%	83.0%
3976669	7579.1.1.6 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1	0.54	42.0	3.60e-01	82.2%	86.4%
3397916	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.54	37.0	2.41e-01	70.6%	23.8%
3385523	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.52	19.0	2.45e-01	74.1%	51.8%
4961034	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.52	28.0	3.58e-01	91.4%	90.9%
5002092	283.2.1.0 ↗	a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like	0.51	19.0	2.88e-01	80.2%	76.7%