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IE-1_protein

Euk-Vir

Thysanoplusia_orichalcea_nucleopolyhedrovirus

IE-1_protein__YP_007250550__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850

Identity

Accession:
YP_007250550 ↗
Protein ID:
IE-1_protein
Kingdom:
euk

Quality

66.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Thysanoplusia_orichalcea_nucleopolyhedrovirus

TaxID: 101850

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 213-344
PDB
Domain cluster: rep: IE-1__YP_009330138__Plodia_interpunctella_granulovirus__262175__D62-179
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03430.21 best TATR 169.0 2.60e-49 100.0% 30.5%
D2 high residues 391-584
PDB
Domain cluster: rep: IE-1__YP_009552572__Operophtera_brumata_nucleopolyhedrovirus__1046267__D273-305_322-485
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03430.21 best TATR 217.5 4.90e-64 97.9% 45.4%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vseB02 3.30.750.80 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like 0.69 30.0 4.23e-01 100.0% 81.0%
2b78A02 3.30.750.80 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like 0.67 30.0 4.15e-01 100.0% 81.4%
3c0kA02 3.30.750.80 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like 0.67 33.0 4.33e-01 100.0% 83.5%
2zsgA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.65 31.0 3.79e-01 87.1% 68.8%
6upsA01 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.64 46.0 5.11e-01 76.8% 92.3%
3il0A00 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.62 30.0 3.63e-01 87.6% 67.2%
5cdvA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.61 29.0 3.56e-01 87.6% 68.5%
5ce6A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.58 35.0 3.80e-01 88.1% 70.1%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 20.0 3.09e-01 81.4% 76.3%
6a8mA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.57 34.0 3.65e-01 88.1% 66.7%
5jr6A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.56 31.0 3.44e-01 87.1% 65.8%
3ctzA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.55 31.0 3.46e-01 87.6% 68.6%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 19.0 2.66e-01 74.7% 61.5%
2nttA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 17.0 2.78e-01 90.2% 74.3%
3cb6A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.53 33.0 3.45e-01 87.1% 66.9%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.52 25.0 3.44e-01 78.9% 93.4%
2qb7B02 3.10.310.20 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain 0.52 36.0 4.08e-01 91.2% 97.1%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 25.0 3.17e-01 99.5% 76.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3962117 2008.1.1.215 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4191 0.63 33.0 4.25e-01 73.2% 88.2%
3350758 2484.3.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.61 28.0 3.63e-01 82.5% 73.0%
5057439 2484.3.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.60 29.0 3.56e-01 87.6% 68.8%
3444177 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 26.0 3.90e-01 71.1% 98.8%
3678841 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 26.0 3.76e-01 75.8% 94.1%
3964852 2484.3.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.58 31.0 3.55e-01 87.6% 68.3%
4047196 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 44.0 3.84e-01 93.8% 54.3%
3963230 3261.1.1.1 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.57 25.0 3.81e-01 73.2% 98.8%
5044613 3261.1.1.1 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.57 22.0 3.61e-01 74.2% 97.1%
3394097 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.57 30.0 3.93e-01 84.5% 95.0%
4108958 2484.3.1.3 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › FACT-Spt16_Nlob 0.57 34.0 3.55e-01 87.6% 64.0%
3209694 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 26.0 3.44e-01 80.4% 80.0%
4306585 2007.2.2.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › Ssu72 0.55 43.0 4.48e-01 80.4% 96.7%
4948758 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 20.0 3.08e-01 74.7% 82.9%
4961034 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 30.0 3.77e-01 98.5% 90.9%
3408937 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 23.0 3.38e-01 71.6% 91.3%
5079657 5104.1.1.0 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.54 33.0 4.00e-01 89.7% 98.3%
4348174 3261.1.1.1 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.54 21.0 3.49e-01 71.6% 100.0%
4461627 5104.1.1.1 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.54 35.0 4.09e-01 88.1% 95.4%
3789766 2484.3.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.52 30.0 3.29e-01 87.6% 65.5%
3267396 2484.3.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N 0.52 30.0 3.25e-01 88.7% 66.1%
3830828 7579.1.1.14 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.50 37.0 3.24e-01 76.3% 94.5%