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IIIa

Euk-Vir

Psittacine_adenovirus_3

IIIa__YP_009112719__Psittacine_adenovirus_3__1580497

Identity

Accession:: YP_009112719 ↗
Protein ID:: IIIa
Kingdom:: euk

Quality

62.3 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Barthadenovirus› Psittacine_adenovirus_3

TaxID: 1580497

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 52-114

PDB

Domain cluster: rep: pIIIa__YP_004346924__Fowl_aviadenovirus_C__190063__D57-124

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	49.6	3.90e-13	95.2%	11.9%

D2 high residues 302-388

PDB

Domain cluster: rep: pIIIa__NP_077392__Bovine_atadenovirus_D__130499__D257-346

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	105.9	3.30e-30	100.0%	15.8%

D3 medium residues 118-192

PDB

Domain cluster: rep: pIIIa__YP_009051657__Lizard_adenovirus_2__874272__D119-176

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	100.5	1.50e-28	100.0%	13.5%

D4 medium residues 193-255

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02455.22 best	Hex_IIIa	60.3	2.30e-16	100.0%	11.9%

CATH (17)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2v4jA01	6.10.140.1420	Special › Helix non-globular › Helix Hairpins ›	0.64	34.0	3.42e-01	100.0%	50.8%
2jbyA00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.64	50.0	4.08e-01	88.9%	74.8%
3di2A00	1.20.1250.50	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.64	49.0	4.14e-01	87.3%	80.0%
4o5fA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.63	49.0	3.93e-01	90.5%	42.5%
8d7hD01	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.60	49.0	3.63e-01	92.1%	78.6%
1n1bB02	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.59	47.0	3.00e-01	85.7%	32.2%
4pkwA02	1.10.2030.10	Mainly Alpha › Orthogonal Bundle › Anthrax toxin lethal factor, domain 3, chain A › Anthrax toxin lethal factor, domain 3, chain A	0.59	41.0	4.17e-01	81.0%	73.0%
4p1wD00	1.10.10.2570	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.58	43.0	4.27e-01	82.5%	75.8%
3p5pA03	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.57	45.0	2.92e-01	85.7%	31.1%
4m88A01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.57	42.0	2.95e-01	79.4%	78.3%
2hsnA02	1.20.1050.110	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.55	40.0	3.39e-01	96.8%	44.9%
1zq3P00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.55	44.0	4.33e-01	88.9%	92.6%
3keyA01	1.10.10.1080	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain	0.53	35.0	3.11e-01	85.7%	49.4%
3nowA02	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.53	44.0	2.74e-01	100.0%	47.7%
3vldA02	1.25.40.580	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.52	43.0	3.39e-01	98.4%	75.8%
2imsA00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.50	37.0	2.94e-01	87.3%	74.2%
7nc3F01	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.50	41.0	3.50e-01	96.8%	54.4%

ECOD (21)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4864637	7008.1.1.1 ↗	alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa	0.89	77.0	5.84e-01	93.7%	43.0%
2643578	7009.1.1.1 ↗	alpha bundles › Middle domain of hexon-associated protein (IIIa) › Middle domain of hexon-associated protein (IIIa) › Middle domain of hexon-associated protein (IIIa) › Hex_IIIa	0.89	81.0	6.08e-01	96.8%	44.2%
4823693	7008.1.1.1 ↗	alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa	0.82	76.0	5.65e-01	100.0%	43.2%
3488562	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.71	53.0	4.58e-01	100.0%	51.0%
3219497	103.4.1.5 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2	0.71	33.0	3.21e-01	87.3%	41.4%
5001301	3636.1.1.0 ↗	a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain	0.62	44.0	3.43e-01	74.6%	77.0%
3453441	141.1.1.4 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C	0.61	48.0	3.03e-01	85.7%	30.6%
3674639	141.1.1.4 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C	0.60	49.0	3.09e-01	87.3%	30.6%
3400457	109.4.1.839 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT	0.60	42.0	3.27e-01	76.2%	64.5%
2777206	3909.1.1.0 ↗	alpha bundles › NisB C-terminal helical domain › NisB C-terminal helical domain › NisB C-terminal helical domain	0.59	44.0	2.99e-01	82.5%	65.4%
4497406	141.1.1.4 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C	0.58	46.0	2.93e-01	85.7%	29.4%
3592804	267.1.1.3 ↗	a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase	0.58	49.0	3.35e-01	98.4%	41.8%
4286266	141.1.1.4 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C	0.58	45.0	2.91e-01	85.7%	30.2%
3688155	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.57	44.0	2.65e-01	88.9%	95.3%
3953371	5050.1.1.55 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, MFS_1	0.56	43.0	2.64e-01	88.9%	93.3%
5029464	142.1.1.0 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors	0.55	42.0	3.86e-01	81.0%	88.7%
3580117	192.4.1.0 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p)	0.55	38.0	3.63e-01	73.0%	100.0%
5033225	7512.1.1.8 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2	0.54	43.0	3.04e-01	90.5%	50.2%
3991875	604.13.1.0 ↗	alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like	0.52	40.0	3.41e-01	85.7%	76.4%
4017247	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.51	45.0	3.23e-01	100.0%	67.9%
3644831	101.1.1.3 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding	0.50	39.0	3.79e-01	90.5%	85.3%