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II
Euk-VirBaboon_adenovirus_3
II__YP_007906008__Baboon_adenovirus_3__1298385
Identity
- Accession:
- YP_007906008 ↗
- Protein ID:
- II
- Kingdom:
- euk
Quality
63.5
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Baboon_adenovirus_3
TaxID: 1298385
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 133-299_400-431
Domain cluster:
rep: hexon__YP_009362848__Bat_mastadenovirus_WIV17__1986505__D115-307_370-416_787-818
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dhxA01 | 2.170.9.10 | Mainly Beta › Beta Complex › Adenovirus Type 2 Hexon; domain 1 › Adenovirus Type 2 Hexon, domain 1 | 0.57 | 43.0 | 4.72e-01 | 76.9% | 93.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2719199 | 10.2.1.17 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon | 0.90 | 68.0 | 5.33e-01 | 83.9% | 41.5% |
| 2080941 | 10.2.1.17 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon | 0.90 | 74.0 | 4.95e-01 | 83.9% | 29.9% |
| 410054 | 10.2.1.17 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon | 0.84 | 64.0 | 4.45e-01 | 83.9% | 26.8% |
| 4889924 | 10.2.1.90 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon, Adeno_hexon_C | 0.83 | 61.0 | 4.05e-01 | 83.9% | 23.5% |
| 163336 | 10.2.1.17 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon | 0.77 | 57.0 | 3.89e-01 | 83.9% | 24.9% |
D2
medium
residues 95-124_300-312_514-547_561-586
Domain cluster:
rep: hexon__YP_010087266__Ovine_adenovirus_8__2601527__D105-124_263-298_425-483_786-814
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01065.25 best | Adeno_hexon | 83.4 | 1.90e-23 | 59.2% | 12.3% |
| PF01065.25 | Adeno_hexon | 53.7 | 2.00e-14 | 31.1% | 5.5% |
D3
medium
residues 313-323_336-368_548-560_587-611
D4
medium
residues 462-513
D5
medium
residues 612-722_868-927