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IMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18403950
Arc-VirIMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18403950
Identity
- Kingdom:
- archaea
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-171
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.70 | 56.0 | 5.98e-01 | 94.0% | 93.3% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 56.0 | 5.80e-01 | 94.0% | 89.7% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 55.0 | 5.67e-01 | 94.0% | 86.9% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 57.0 | 5.88e-01 | 94.0% | 90.1% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.67 | 53.0 | 5.64e-01 | 94.0% | 92.5% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 48.0 | 5.29e-01 | 90.5% | 93.4% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.62 | 40.0 | 4.50e-01 | 94.0% | 85.6% |
| 2qswA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 25.0 | 3.36e-01 | 78.6% | 67.8% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 40.0 | 4.23e-01 | 96.4% | 72.8% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.58 | 42.0 | 4.14e-01 | 94.0% | 70.9% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 27.0 | 3.62e-01 | 92.9% | 81.3% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 39.0 | 4.21e-01 | 94.0% | 84.4% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.54 | 32.0 | 3.45e-01 | 98.2% | 68.6% |
| 5lt5A02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.52 | 31.0 | 3.88e-01 | 85.7% | 97.1% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 27.0 | 3.25e-01 | 70.8% | 76.9% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.52 | 29.0 | 3.70e-01 | 94.6% | 94.8% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.53e-01 | 85.1% | 80.3% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 39.0 | 4.07e-01 | 93.5% | 86.5% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.91 | 70.0 | 7.88e-01 | 100.0% | 97.8% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.82 | 73.0 | 7.48e-01 | 98.8% | 97.5% |
| 4514734 | 1.1.13.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube | 0.82 | 52.0 | 6.35e-01 | 89.3% | 97.3% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.80 | 45.0 | 5.72e-01 | 94.0% | 90.5% |
| 5040331 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 65.0 | 6.94e-01 | 96.4% | 100.0% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 58.0 | 6.53e-01 | 89.9% | 98.5% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.78 | 58.0 | 6.28e-01 | 92.9% | 91.4% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 67.0 | 6.90e-01 | 91.1% | 98.8% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 50.0 | 6.14e-01 | 91.1% | 100.0% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.76 | 47.0 | 5.81e-01 | 85.7% | 99.0% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.75 | 59.0 | 4.95e-01 | 100.0% | 50.4% |
| 3943316 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.75 | 65.0 | 6.71e-01 | 95.8% | 95.6% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 42.0 | 5.48e-01 | 86.9% | 96.8% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.74 | 40.0 | 5.43e-01 | 88.1% | 100.0% |
| 4878666 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.73 | 55.0 | 6.05e-01 | 94.0% | 92.8% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 59.0 | 6.03e-01 | 99.4% | 86.7% |
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 62.0 | 6.40e-01 | 89.9% | 95.0% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 52.0 | 5.96e-01 | 91.1% | 100.0% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 47.0 | 5.69e-01 | 88.7% | 97.4% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.71 | 46.0 | 5.57e-01 | 84.5% | 99.1% |
| 1124583 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.70 | 56.0 | 5.98e-01 | 94.0% | 93.3% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 57.0 | 5.95e-01 | 94.0% | 91.6% |
| 3977123 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 57.0 | 5.91e-01 | 94.0% | 90.0% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.69 | 56.0 | 5.92e-01 | 91.1% | 93.5% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 41.0 | 5.24e-01 | 86.3% | 98.0% |
| 4982153 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.69 | 54.0 | 4.51e-01 | 92.9% | 50.4% |
| 1563850 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 55.0 | 5.67e-01 | 94.0% | 86.9% |
| 5004308 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 58.0 | 6.02e-01 | 93.5% | 96.1% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.69 | 55.0 | 5.76e-01 | 93.5% | 89.7% |
| 80 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.68 | 57.0 | 5.83e-01 | 94.0% | 90.0% |
| 3969384 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 57.0 | 5.90e-01 | 94.0% | 92.5% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.67 | 36.0 | 4.86e-01 | 73.2% | 100.0% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.67 | 48.0 | 5.27e-01 | 87.5% | 91.1% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.65 | 45.0 | 5.13e-01 | 88.1% | 95.2% |
| 3265120 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 55.0 | 5.49e-01 | 94.0% | 89.1% |
| 164720 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 40.0 | 4.23e-01 | 96.4% | 72.8% |
| 3264744 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.61 | 55.0 | 5.43e-01 | 94.0% | 89.1% |
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.61 | 51.0 | 5.36e-01 | 88.7% | 97.3% |
| 3513366 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 52.0 | 5.20e-01 | 93.5% | 96.0% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 50.0 | 4.79e-01 | 89.3% | 82.1% |
| 3190573 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.56 | 22.0 | 3.41e-01 | 72.6% | 100.0% |
| 5041917 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.53 | 29.0 | 3.66e-01 | 83.9% | 95.6% |
D2
high
residues 188-335
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nh2C00 | 2.30.18.10 | Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain | 0.70 | 22.0 | 3.92e-01 | 83.1% | 86.0% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 42.0 | 4.23e-01 | 100.0% | 59.9% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 30.0 | 3.79e-01 | 73.0% | 74.2% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.62 | 28.0 | 3.58e-01 | 71.6% | 70.6% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 39.0 | 4.27e-01 | 98.0% | 75.8% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 35.0 | 3.92e-01 | 95.3% | 75.9% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 34.0 | 4.20e-01 | 94.6% | 97.8% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.55 | 44.0 | 4.38e-01 | 85.1% | 82.7% |
| 1d06A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 34.0 | 3.60e-01 | 83.1% | 74.6% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 33.0 | 3.91e-01 | 84.5% | 94.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.87 | 78.0 | 7.62e-01 | 97.3% | 86.3% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.85 | 61.0 | 4.83e-01 | 97.3% | 40.0% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.83 | 66.0 | 6.79e-01 | 100.0% | 86.4% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 56.0 | 6.40e-01 | 98.6% | 92.7% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.81 | 67.0 | 6.51e-01 | 100.0% | 80.0% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.80 | 61.0 | 6.45e-01 | 98.6% | 89.2% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.80 | 63.0 | 6.07e-01 | 98.6% | 73.8% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.79 | 55.0 | 5.75e-01 | 99.3% | 77.0% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.79 | 63.0 | 6.06e-01 | 99.3% | 73.5% |
| 4514734 | 1.1.13.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube | 0.78 | 53.0 | 6.03e-01 | 96.6% | 91.8% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 60.0 | 6.45e-01 | 99.3% | 93.1% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 59.0 | 6.28e-01 | 97.3% | 93.8% |
| 5040331 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.71 | 57.0 | 5.76e-01 | 99.3% | 84.8% |
| 2387782 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 59.0 | 5.62e-01 | 100.0% | 80.4% |
| 3987460 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.66 | 40.0 | 4.55e-01 | 100.0% | 80.9% |
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.65 | 53.0 | 5.29e-01 | 85.8% | 84.0% |
| 3296288 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.61 | 34.0 | 3.86e-01 | 70.9% | 70.9% |
| 3264977 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.60 | 36.0 | 3.95e-01 | 97.3% | 72.5% |
| 3427288 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 35.0 | 3.84e-01 | 95.3% | 77.5% |
| 3935896 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.54 | 31.0 | 3.37e-01 | 91.9% | 64.6% |
| 3965912 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 31.0 | 3.80e-01 | 79.7% | 88.4% |
| 4952370 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 34.0 | 3.35e-01 | 83.1% | 62.6% |
| 3564124 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 32.0 | 3.98e-01 | 74.3% | 100.0% |
D3
high
residues 346-486