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IMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18404270
Arc-VirIMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18404270
Identity
- Kingdom:
- archaea
Quality
78.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-57
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 62.0 | 5.91e-01 | 91.1% | 63.5% |
| 4chuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 61.0 | 4.64e-01 | 96.4% | 35.7% |
| 2mlkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 59.0 | 4.64e-01 | 91.1% | 41.8% |
| 3zq7A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 59.0 | 4.78e-01 | 91.1% | 45.5% |
| 4dhxB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.76 | 55.0 | 4.65e-01 | 76.8% | 49.5% |
| 2oqrA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 57.0 | 4.58e-01 | 91.1% | 43.0% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 65.0 | 5.17e-01 | 100.0% | 63.2% |
| 3e3vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 5.96e-01 | 100.0% | 92.5% |
| 4ixjA02 | 3.30.1690.20 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › | 0.71 | 64.0 | 4.69e-01 | 100.0% | 83.7% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 56.0 | 4.34e-01 | 96.4% | 38.4% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 60.0 | 4.11e-01 | 100.0% | 27.5% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 50.0 | 3.91e-01 | 76.8% | 60.2% |
| 6qm7A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.70 | 61.0 | 3.99e-01 | 100.0% | 62.7% |
| 2hqrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 4.39e-01 | 89.3% | 45.3% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.69 | 56.0 | 5.13e-01 | 96.4% | 68.0% |
| 3cdlA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 58.0 | 5.88e-01 | 100.0% | 98.1% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 49.0 | 3.17e-01 | 76.8% | 22.5% |
| 1q8cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.69 | 59.0 | 4.55e-01 | 100.0% | 44.7% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 55.0 | 4.47e-01 | 100.0% | 48.1% |
| 1kxpD01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 48.0 | 4.19e-01 | 75.0% | 50.0% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 50.0 | 3.66e-01 | 78.6% | 36.8% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.66 | 56.0 | 3.98e-01 | 100.0% | 82.0% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 57.0 | 5.08e-01 | 100.0% | 70.4% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 49.0 | 5.16e-01 | 100.0% | 100.0% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 51.0 | 5.05e-01 | 100.0% | 86.2% |
| 3t38A01 | 1.10.8.1060 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain | 0.65 | 45.0 | 4.24e-01 | 75.0% | 59.2% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 42.0 | 3.91e-01 | 80.4% | 52.9% |
| 3dewA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 48.0 | 4.98e-01 | 94.6% | 90.4% |
| 2iaiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 46.0 | 4.46e-01 | 92.9% | 69.2% |
| 2hxiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 49.0 | 4.70e-01 | 98.2% | 79.7% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.80e-01 | 94.6% | 100.0% |
| 6el2B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 45.0 | 4.65e-01 | 92.9% | 95.9% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 51.0 | 4.59e-01 | 100.0% | 70.7% |
| 3gn4A00 | 6.10.220.10 | Special › Helix non-globular › Helical scaffold and wing domains of SecA › | 0.58 | 44.0 | 3.32e-01 | 89.3% | 34.9% |
| 3d31A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 2.83e-01 | 96.4% | 19.5% |
| 2k4jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.73e-01 | 94.6% | 54.3% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.54 | 43.0 | 3.82e-01 | 98.2% | 71.9% |
| 3b4yA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.54 | 42.0 | 2.62e-01 | 85.7% | 28.3% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.15e-01 | 100.0% | 37.7% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254663 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.89 | 79.0 | 7.10e-01 | 100.0% | 72.0% |
| 5057991 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 67.0 | 6.23e-01 | 98.2% | 77.1% |
| 4017983 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 66.0 | 5.63e-01 | 98.2% | 64.4% |
| 3340029 | 101.1.1.176 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DEK_C | 0.75 | 65.0 | 5.87e-01 | 94.6% | 70.7% |
| 4478972 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.74 | 62.0 | 4.95e-01 | 100.0% | 47.3% |
| 3190506 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 63.0 | 5.65e-01 | 96.4% | 73.8% |
| 3447076 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 63.0 | 5.46e-01 | 98.2% | 65.6% |
| 3822906 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.74 | 66.0 | 6.13e-01 | 100.0% | 80.0% |
| 1068636 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.73 | 58.0 | 5.96e-01 | 100.0% | 92.5% |
| 3487600 | 101.1.2.416 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Egal | 0.73 | 63.0 | 5.79e-01 | 100.0% | 84.0% |
| 3646654 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 5.00e-01 | 100.0% | 49.2% |
| 3421266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 61.0 | 4.90e-01 | 98.2% | 49.2% |
| 3455132 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.73 | 63.0 | 4.98e-01 | 100.0% | 49.2% |
| 3737537 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.72 | 59.0 | 5.69e-01 | 100.0% | 78.5% |
| 3881038 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.72 | 63.0 | 6.19e-01 | 98.2% | 90.0% |
| 3422404 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.71 | 60.0 | 4.85e-01 | 98.2% | 50.4% |
| 3987671 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 57.0 | 5.80e-01 | 96.4% | 90.9% |
| 3442072 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.71 | 61.0 | 4.80e-01 | 100.0% | 48.0% |
| 138558 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 60.0 | 5.68e-01 | 100.0% | 80.3% |
| 3482846 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 57.0 | 5.64e-01 | 91.1% | 85.0% |
| 3450546 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 62.0 | 4.85e-01 | 100.0% | 100.0% |
| 3278979 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 59.0 | 5.36e-01 | 100.0% | 70.7% |
| 3469087 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.70 | 55.0 | 5.21e-01 | 91.1% | 80.0% |
| 3286480 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.90e-01 | 100.0% | 96.4% |
| 3952000 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 60.0 | 5.36e-01 | 100.0% | 70.0% |
| 339417 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.28e-01 | 100.0% | 71.6% |
| 386667 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 60.0 | 5.26e-01 | 100.0% | 66.7% |
| 3641442 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.68 | 59.0 | 4.85e-01 | 100.0% | 94.3% |
| 3922607 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 58.0 | 4.93e-01 | 98.2% | 62.1% |
| 3229498 | 101.1.1.102 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 | 0.68 | 59.0 | 4.56e-01 | 98.2% | 46.4% |
| 4032499 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 5.25e-01 | 100.0% | 80.0% |
| 3946840 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 50.0 | 5.36e-01 | 87.5% | 100.0% |
| 3680460 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.67 | 58.0 | 5.25e-01 | 100.0% | 97.5% |
| 3388668 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.67 | 56.0 | 4.95e-01 | 100.0% | 66.7% |
| 3177851 | 148.1.1.3 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone,Histone_H2A_C | 0.67 | 52.0 | 4.30e-01 | 87.5% | 47.6% |
| 3951353 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 51.0 | 4.63e-01 | 100.0% | 61.3% |
| 3287545 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 51.0 | 4.60e-01 | 100.0% | 61.3% |
| 3481387 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 58.0 | 4.55e-01 | 100.0% | 64.2% |
| 3224878 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.66 | 57.0 | 4.89e-01 | 98.2% | 68.9% |
| 3290883 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 56.0 | 5.15e-01 | 98.2% | 73.3% |
| 3952683 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.65 | 53.0 | 5.03e-01 | 100.0% | 74.3% |
| 3283044 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.65 | 54.0 | 5.09e-01 | 94.6% | 75.7% |
| 4982265 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.65 | 48.0 | 4.45e-01 | 94.6% | 61.3% |
| 3927517 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 53.0 | 4.53e-01 | 98.2% | 65.0% |
| 386744 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 50.0 | 4.62e-01 | 100.0% | 64.9% |
| 169088 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 48.0 | 4.52e-01 | 94.6% | 66.2% |
| 3987997 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 4.94e-01 | 100.0% | 90.7% |
| 4957942 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 56.0 | 5.23e-01 | 100.0% | 80.0% |
| 3284035 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 50.0 | 4.71e-01 | 100.0% | 71.4% |
| 3284892 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 52.0 | 4.93e-01 | 94.6% | 75.7% |
| 3288981 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 54.0 | 4.77e-01 | 98.2% | 64.7% |
| 3235659 | 101.1.1.102 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 | 0.63 | 52.0 | 5.01e-01 | 98.2% | 84.6% |
| 3958171 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 48.0 | 4.63e-01 | 96.4% | 73.8% |
| 3387885 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 48.0 | 4.65e-01 | 100.0% | 76.9% |
| 5016743 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 53.0 | 4.91e-01 | 100.0% | 96.0% |
| 140299 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.61 | 47.0 | 4.39e-01 | 98.2% | 67.1% |