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IMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18404380
Arc-VirIMGVR_UViG_2061766007_001514-2061766007-_HiSeq_18404380
Identity
- Kingdom:
- archaea
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-155_160-175
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 93.7 | 1.70e-26 | 97.5% | 24.5% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b8bA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 74.0 | 4.96e-01 | 100.0% | 31.3% |
| 4d8tA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 40.0 | 4.67e-01 | 88.1% | 89.0% |
| 1sxjA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 42.0 | 4.11e-01 | 90.0% | 61.5% |
| 1kfwA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 54.0 | 4.15e-01 | 100.0% | 79.8% |
| 7y11A01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.59 | 50.0 | 4.65e-01 | 100.0% | 73.0% |
| 5z87A01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.58 | 54.0 | 4.13e-01 | 100.0% | 61.8% |
| 5z9sB01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.58 | 53.0 | 4.12e-01 | 99.4% | 64.5% |
| 5z3kB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 52.0 | 4.11e-01 | 100.0% | 74.9% |
| 4ei7A02 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.56 | 51.0 | 4.47e-01 | 99.4% | 85.5% |
| 1t7lB01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.55 | 49.0 | 3.78e-01 | 100.0% | 67.2% |
| 7zb5E01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.54 | 43.0 | 3.49e-01 | 95.0% | 44.6% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 50.0 | 4.09e-01 | 99.4% | 75.2% |
| 3l77A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 49.0 | 4.33e-01 | 99.4% | 88.9% |
| 4gmnA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 43.0 | 3.00e-01 | 84.4% | 26.3% |
| 5hexA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.54 | 42.0 | 3.49e-01 | 81.2% | 96.8% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.93e-01 | 100.0% | 77.4% |
| 1telA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.54 | 41.0 | 3.41e-01 | 91.9% | 45.2% |
| 4b79B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 48.0 | 4.26e-01 | 98.8% | 89.7% |
| 1kl7A03 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 45.0 | 4.58e-01 | 90.0% | 92.9% |
| 3thaB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 4.09e-01 | 100.0% | 62.2% |
| 2i14A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 38.0 | 3.58e-01 | 100.0% | 60.2% |
| 6imeA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.53 | 48.0 | 4.07e-01 | 100.0% | 71.8% |
| 4qs8A01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.53 | 41.0 | 3.44e-01 | 81.2% | 95.4% |
| 3a1fA00 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.53 | 44.0 | 4.42e-01 | 90.0% | 87.1% |
| 5klkB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 46.0 | 3.74e-01 | 93.1% | 95.5% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 47.0 | 4.01e-01 | 98.8% | 84.0% |
| 4bqhA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 40.0 | 2.84e-01 | 81.2% | 57.4% |
| 8hi4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.03e-01 | 98.8% | 97.6% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 45.0 | 3.67e-01 | 94.4% | 91.1% |
| 2d1fA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 47.0 | 4.02e-01 | 99.4% | 63.7% |
| 2c13A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 46.0 | 3.66e-01 | 100.0% | 61.0% |
| 2amxB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 46.0 | 3.60e-01 | 100.0% | 57.3% |
| 3i44A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 44.0 | 3.64e-01 | 93.1% | 95.4% |
| 6fjxA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 43.0 | 3.68e-01 | 93.8% | 94.8% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.51 | 35.0 | 3.89e-01 | 89.4% | 89.7% |
| 2ggsA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 46.0 | 4.23e-01 | 99.4% | 97.6% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.50 | 45.0 | 3.95e-01 | 99.4% | 71.0% |
| 2vhlA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 46.0 | 3.73e-01 | 100.0% | 72.1% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 45.0 | 3.72e-01 | 100.0% | 63.0% |
| 2hf9B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 41.0 | 3.78e-01 | 87.5% | 97.6% |
| 1b2rA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.50 | 41.0 | 4.05e-01 | 93.1% | 82.6% |
| 7w5lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.50 | 39.0 | 3.40e-01 | 92.5% | 52.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942624 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.94 | 90.0 | 6.38e-01 | 100.0% | 38.7% |
| 4961008 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.93 | 91.0 | 5.82e-01 | 100.0% | 26.6% |
| 4970624 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 85.0 | 5.59e-01 | 100.0% | 27.4% |
| 4976938 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 89.0 | 5.71e-01 | 100.0% | 26.3% |
| 5031517 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.92 | 88.0 | 5.76e-01 | 100.0% | 28.0% |
| 5048774 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.92 | 88.0 | 5.72e-01 | 100.0% | 26.7% |
| 4974476 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.92 | 89.0 | 5.65e-01 | 100.0% | 28.2% |
| 3603295 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.92 | 85.0 | 5.53e-01 | 100.0% | 26.9% |
| 5004456 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.91 | 88.0 | 5.61e-01 | 100.0% | 27.8% |
| 5079907 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.91 | 88.0 | 5.67e-01 | 100.0% | 26.8% |
| 5037353 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.91 | 87.0 | 5.64e-01 | 100.0% | 26.5% |
| 5074578 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.91 | 86.0 | 5.61e-01 | 100.0% | 26.8% |
| 4949117 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.90 | 86.0 | 5.99e-01 | 99.4% | 74.4% |
| 5044308 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.90 | 78.0 | 5.04e-01 | 100.0% | 23.7% |
| 5031462 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.90 | 86.0 | 5.79e-01 | 100.0% | 34.9% |
| 4934728 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.89 | 85.0 | 5.55e-01 | 100.0% | 26.9% |
| 5001541 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.89 | 85.0 | 5.51e-01 | 100.0% | 33.0% |
| 5065401 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.89 | 85.0 | 5.42e-01 | 100.0% | 28.7% |
| 5012376 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.89 | 85.0 | 5.52e-01 | 100.0% | 27.2% |
| 4954935 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.87 | 83.0 | 5.35e-01 | 100.0% | 29.0% |
| 4982642 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.86 | 83.0 | 5.47e-01 | 100.0% | 31.2% |
| 5057094 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.85 | 82.0 | 5.44e-01 | 99.4% | 62.4% |
| 5053026 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.84 | 81.0 | 5.44e-01 | 100.0% | 68.9% |
| 4987959 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.83 | 79.0 | 5.33e-01 | 99.4% | 68.3% |
| 3100301 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.76 | 73.0 | 4.66e-01 | 100.0% | 30.9% |
| 4994565 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.70 | 67.0 | 4.71e-01 | 99.4% | 66.9% |
| 4667495 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.58 | 52.0 | 4.67e-01 | 98.8% | 84.4% |
| 3614485 | 109.4.1.33 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT | 0.57 | 47.0 | 3.47e-01 | 88.7% | 42.1% |
| 3188446 | 7579.1.1.18 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_2 | 0.57 | 52.0 | 4.21e-01 | 98.8% | 94.2% |
| 3190791 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.56 | 50.0 | 4.57e-01 | 99.4% | 89.5% |
| 3613986 | 109.4.1.3310 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GYF_2 | 0.56 | 48.0 | 3.60e-01 | 91.9% | 83.0% |
| 4277518 | 7563.1.1.4 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › YpsA | 0.56 | 50.0 | 4.80e-01 | 100.0% | 84.2% |
| 3183795 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.55 | 43.0 | 3.74e-01 | 91.9% | 53.9% |
| 3728244 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.54 | 49.0 | 4.06e-01 | 98.8% | 75.4% |
| 3642960 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.54 | 48.0 | 3.73e-01 | 98.1% | 89.1% |
| 3515857 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 47.0 | 3.35e-01 | 95.6% | 54.8% |
| 3893248 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.53 | 41.0 | 2.92e-01 | 83.1% | 81.0% |
| 4012631 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 47.0 | 3.85e-01 | 98.8% | 74.3% |
| 3718998 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 41.0 | 2.66e-01 | 81.2% | 19.0% |
| 5071915 | 7566.1.1.2 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N | 0.52 | 45.0 | 3.48e-01 | 95.6% | 67.6% |
| 3392843 | 109.4.1.328 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2428 | 0.52 | 43.0 | 3.58e-01 | 89.4% | 81.0% |