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IMGVR_UViG_2140918027_000117-2140918027-ADL36m2_02265070

Arc-Vir

IMGVR_UViG_2140918027_000117-2140918027-ADL36m2_02265070

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-95
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 4.80e-01 71.2% 57.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 5.18e-01 73.8% 75.0%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 4.22e-01 75.0% 39.3%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.44e-01 73.8% 49.2%
5bpdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.31e-01 71.2% 76.0%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 5.13e-01 75.0% 74.2%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 4.63e-01 75.0% 55.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.04e-01 73.8% 77.0%
4f52C02 3.30.230.130 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Cullin; Chain C, Domain 2 0.73 52.0 4.13e-01 75.0% 44.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.78e-01 73.8% 66.0%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 5.11e-01 75.0% 71.3%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.23e-01 73.8% 45.8%
1bbyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 49.0 5.26e-01 73.8% 81.2%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.56e-01 76.2% 89.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.22e-01 73.8% 44.3%
3u9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 5.58e-01 73.8% 93.5%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 4.68e-01 73.8% 65.3%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 5.25e-01 71.2% 83.8%
5a48B00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.71 50.0 4.73e-01 73.8% 70.8%
1q1hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.05e-01 76.2% 78.8%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 49.0 4.18e-01 71.2% 77.2%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 5.57e-01 77.5% 96.8%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.45e-01 75.0% 56.4%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.57e-01 72.5% 63.4%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 4.94e-01 76.2% 81.7%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.70e-01 72.5% 79.8%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.68 47.0 3.92e-01 71.2% 51.4%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 4.65e-01 71.2% 86.4%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.07e-01 80.0% 83.7%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.43e-01 73.8% 60.6%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.47e-01 72.5% 72.0%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.14e-01 76.2% 52.0%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.59e-01 75.0% 70.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 47.0 4.12e-01 76.2% 57.5%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.93e-01 72.5% 100.0%
1pp8O00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 4.20e-01 75.0% 81.4%
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.61 45.0 4.20e-01 78.8% 70.3%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.61 43.0 4.56e-01 75.0% 91.4%
2ctdA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 25.0 2.41e-01 70.0% 31.2%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 52.0 3.89e-01 100.0% 68.9%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 4.29e-01 98.8% 96.8%
1af7A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 32.0 2.51e-01 72.5% 22.7%
3uifA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 46.0 3.38e-01 100.0% 65.6%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983659 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.80 55.0 5.15e-01 71.2% 62.2%
3663719 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.79 54.0 4.77e-01 71.2% 59.1%
4993831 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.79 54.0 4.85e-01 71.2% 55.5%
4964795 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 55.0 5.57e-01 72.5% 77.5%
4221580 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.78 54.0 5.00e-01 71.2% 61.0%
4453560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 51.0 4.51e-01 71.2% 47.0%
5024389 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.78 55.0 5.57e-01 73.8% 76.2%
2697269 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.77 53.0 4.70e-01 71.2% 52.6%
4990494 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.77 56.0 5.05e-01 75.0% 60.0%
4020275 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 52.0 5.93e-01 73.8% 93.3%
5071333 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 55.0 5.14e-01 75.0% 60.6%
3187909 101.1.2.35 alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta 0.77 52.0 5.91e-01 73.8% 93.3%
2553300 101.1.2.172 alpha arrays › HTH › HTH › winged helix domain › HTH_53 0.77 52.0 5.94e-01 70.0% 93.3%
5003316 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.76 55.0 5.08e-01 75.0% 62.0%
5077793 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 53.0 5.97e-01 73.8% 96.7%
3724584 101.1.2.35 alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta 0.76 53.0 5.82e-01 75.0% 89.2%
5028158 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.76 52.0 5.07e-01 71.2% 67.0%
5035689 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.76 52.0 5.54e-01 71.2% 84.3%
4991762 101.1.2.643 alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C 0.75 53.0 5.44e-01 72.5% 78.7%
4985664 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.75 54.0 5.59e-01 75.0% 80.0%
4982990 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.75 54.0 5.09e-01 75.0% 66.0%
3602531 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 53.0 4.74e-01 73.8% 60.9%
5021499 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.74 54.0 5.34e-01 76.2% 74.1%
4937136 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.74 54.0 5.02e-01 76.2% 63.0%
1831403 101.1.2.33 alpha arrays › HTH › HTH › winged helix domain › TFIIE_beta 0.74 51.0 5.72e-01 82.5% 93.4%
3798605 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 52.0 5.72e-01 75.0% 90.8%
4956611 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.74 54.0 5.29e-01 76.2% 74.1%
4973870 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 49.0 4.36e-01 70.0% 47.8%
4627436 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.74 52.0 4.32e-01 73.8% 46.8%
4930596 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.73 52.0 4.03e-01 73.8% 39.4%
3831923 101.1.2.35 alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta 0.73 52.0 5.68e-01 75.0% 90.8%
4329890 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.73 53.0 4.24e-01 75.0% 44.7%
3976576 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.72 51.0 5.38e-01 76.2% 82.9%
4142759 101.1.2.762 alpha arrays › HTH › HTH › winged helix domain › PF25863 0.72 52.0 4.80e-01 75.0% 67.0%
4991639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 5.17e-01 73.8% 73.8%
2646 101.1.2.35 alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta 0.72 49.0 5.21e-01 73.8% 81.2%
5064533 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 53.0 5.56e-01 77.5% 100.0%
4954315 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.72 50.0 5.34e-01 75.0% 82.9%
5039794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 51.0 5.11e-01 73.8% 73.8%
5001236 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.71 50.0 5.42e-01 72.5% 90.8%
3938245 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.71 51.0 3.71e-01 75.0% 33.2%
4021012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.42e-01 78.8% 88.0%
3794249 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.71 52.0 5.14e-01 77.5% 78.8%
3392824 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 5.38e-01 100.0% 89.2%
4142054 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.71 51.0 4.37e-01 75.0% 51.2%
4676441 101.1.2.785 alpha arrays › HTH › HTH › winged helix domain › HTH_13 0.71 47.0 5.00e-01 72.5% 78.6%
3279266 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.70 47.0 5.44e-01 71.2% 100.0%
3279128 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.70 49.0 5.25e-01 77.5% 84.3%
4971049 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.70 51.0 5.13e-01 76.2% 82.5%
3617783 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 52.0 5.14e-01 78.8% 78.8%
4999189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 4.64e-01 71.2% 64.4%
3780446 101.1.2.172 alpha arrays › HTH › HTH › winged helix domain › HTH_53 0.70 54.0 4.85e-01 82.5% 92.7%
4968723 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 49.0 4.31e-01 73.8% 49.2%
5017587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 4.87e-01 75.0% 71.8%
5026584 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.68 49.0 4.70e-01 76.2% 75.8%
3284376 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.68 48.0 5.25e-01 87.5% 90.8%
5012709 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 3.47e-01 77.5% 25.5%
3578574 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 45.0 4.33e-01 72.5% 57.9%
4994983 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 5.04e-01 73.8% 84.3%
3221394 101.1.2.118 alpha arrays › HTH › HTH › winged helix domain › Dcc1 0.67 47.0 5.03e-01 73.8% 97.1%
3739297 101.1.2.79 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 0.67 48.0 4.81e-01 75.0% 90.0%
3499819 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.90e-01 72.5% 88.6%
3584275 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.27e-01 72.5% 71.0%
3703451 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.66 47.0 4.53e-01 75.0% 72.2%
3296862 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.65 45.0 4.61e-01 71.2% 81.3%
3295884 101.1.2.132 alpha arrays › HTH › HTH › winged helix domain › DUF3591 0.63 44.0 4.34e-01 72.5% 75.3%
3925501 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.63 45.0 4.21e-01 77.5% 60.0%
3609410 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.35e-01 82.5% 87.3%
4947840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 54.0 3.94e-01 100.0% 96.0%
4975587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.38e-01 76.2% 85.0%
3825121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.25e-01 73.8% 77.5%
3477216 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.60 43.0 4.23e-01 77.5% 71.1%
5009810 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.59 42.0 4.25e-01 75.0% 76.2%
5007549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 41.0 3.91e-01 73.8% 64.2%
3800804 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.35e-01 98.8% 79.2%
3616204 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.56 48.0 4.54e-01 100.0% 96.0%
4946708 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.18e-01 100.0% 79.2%
3933656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.10e-01 97.5% 79.2%
4984663 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.54 41.0 2.83e-01 98.8% 22.0%
3270568 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.50 38.0 2.67e-01 85.0% 82.2%
D2 high residues 100-170
PDB
D3 medium residues 188-241
PDB