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IMGVR_UViG_2264265211_000001-2264265211-2264764730
Arc-VirIMGVR_UViG_2264265211_000001-2264265211-2264764730
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-135
Domain cluster:
rep: IMGVR_UViG_2264867215_000001-2264867215-2265082380__D6-145
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.68 | 38.0 | 4.36e-01 | 100.0% | 75.5% |
| 3lv9A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.64 | 38.0 | 3.82e-01 | 90.8% | 58.5% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.63 | 56.0 | 4.55e-01 | 97.7% | 64.3% |
| 2o5aA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 29.0 | 3.24e-01 | 77.1% | 58.8% |
| 2vldA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 43.0 | 4.60e-01 | 100.0% | 96.3% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 25.0 | 3.18e-01 | 93.9% | 76.5% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.54 | 23.0 | 3.40e-01 | 73.3% | 92.9% |
| 6mtzA01 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.52 | 33.0 | 3.65e-01 | 81.7% | 78.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013988 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 63.0 | 6.38e-01 | 96.9% | 90.8% |
| 4477176 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.74 | 39.0 | 4.77e-01 | 100.0% | 78.8% |
| 4057947 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.69 | 32.0 | 4.30e-01 | 93.9% | 82.9% |
| 3394097 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.68 | 38.0 | 4.28e-01 | 100.0% | 71.0% |
| 3624033 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.64 | 41.0 | 4.34e-01 | 100.0% | 73.0% |
| 4959003 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.63 | 43.0 | 4.92e-01 | 100.0% | 97.9% |
| 2420131 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.63 | 29.0 | 3.72e-01 | 71.8% | 74.7% |
| 4319175 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.62 | 28.0 | 3.86e-01 | 92.4% | 84.6% |
| 5026220 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 55.0 | 5.03e-01 | 96.9% | 94.9% |
| 3968197 | 243.4.1.1 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N | 0.62 | 28.0 | 4.09e-01 | 86.3% | 100.0% |
| 3651616 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.61 | 32.0 | 3.70e-01 | 75.6% | 69.5% |
| 4404325 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.61 | 35.0 | 2.73e-01 | 70.2% | 26.9% |
| 4275104 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 36.0 | 3.81e-01 | 100.0% | 67.0% |
| 4930769 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 42.0 | 4.60e-01 | 100.0% | 89.5% |
| 3352593 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.60 | 21.0 | 2.67e-01 | 78.6% | 47.5% |
| 3964935 | 243.4.1.1 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbC_N | 0.58 | 30.0 | 4.05e-01 | 90.1% | 100.0% |
| 3660003 | 5.1.10.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › ANAPC4_WD40 | 0.56 | 29.0 | 3.65e-01 | 77.1% | 81.2% |
| 5081823 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 43.0 | 4.35e-01 | 100.0% | 80.7% |
| 3643512 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 43.0 | 3.67e-01 | 89.3% | 66.7% |
| 3965967 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 29.0 | 3.23e-01 | 77.9% | 69.0% |
| 1214848 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.50 | 29.0 | 3.18e-01 | 71.0% | 67.0% |
| 3970022 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.50 | 29.0 | 3.33e-01 | 70.2% | 77.9% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.50 | 35.0 | 3.87e-01 | 100.0% | 91.4% |