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IMGVR_UViG_2264867215_000001-2264867215-2265082376

Arc-Vir

IMGVR_UViG_2264867215_000001-2264867215-2265082376

Identity

Kingdom:
archaea

Quality

73.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-79
PDB
Domain cluster: rep: IMGVR_UViG_2788499920_000001-2788499920-2788989484__D19-83
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.64 44.0 3.15e-01 72.1% 63.8%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 48.0 4.69e-01 92.6% 84.4%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.56 45.0 3.25e-01 97.1% 58.0%
3sfvB02 6.10.140.2010 Special › Helix non-globular › Helix Hairpins › 0.55 45.0 3.36e-01 95.6% 39.0%
2x3hA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.55 38.0 2.33e-01 85.3% 10.0%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.55 47.0 4.28e-01 97.1% 84.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 3.91e-01 92.6% 81.4%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 44.0 4.01e-01 95.6% 65.7%
3sfvB01 3.30.450.390 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 43.0 3.60e-01 100.0% 52.1%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.53 44.0 2.94e-01 98.5% 37.5%
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.53 45.0 3.13e-01 100.0% 36.5%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 43.0 3.30e-01 94.1% 73.6%
3witA00 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.51 37.0 3.77e-01 76.5% 93.8%
3oqbH02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 36.0 2.64e-01 80.9% 39.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931934 330.9.1.0 ↗ a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p 0.68 36.0 3.71e-01 82.4% 52.3%
3210934 77.3.1.7 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF31062 0.66 46.0 4.03e-01 73.5% 62.9%
3930081 386.1.1.251 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 0.65 32.0 4.09e-01 83.8% 80.0%
4235474 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.63 56.0 4.25e-01 100.0% 84.1%
3992641 331.4.1.9 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.60 45.0 4.55e-01 100.0% 80.0%
3924841 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 43.0 2.98e-01 76.5% 59.6%
3619889 331.23.1.7 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C 0.60 45.0 4.49e-01 100.0% 80.0%
3684907 4.1.1.235 ↗ beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 0.59 42.0 3.32e-01 75.0% 38.6%
5023640 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.59 47.0 4.56e-01 89.7% 86.1%
4606694 4099.1.1.26 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 0.57 43.0 4.09e-01 83.8% 92.8%
4561170 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.56 41.0 2.60e-01 83.8% 30.3%
4057793 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.55 47.0 3.67e-01 100.0% 65.5%
3953266 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.54 47.0 2.77e-01 100.0% 84.6%
3213871 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 41.0 2.77e-01 89.7% 57.9%
4021531 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 38.0 3.40e-01 75.0% 68.4%
4380974 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.53 45.0 3.53e-01 100.0% 51.9%
3173480 3755.4.1.28 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Kre28 0.53 42.0 3.88e-01 89.7% 94.4%
3388090 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.52 41.0 2.79e-01 91.2% 47.4%
4668932 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.52 44.0 3.09e-01 100.0% 36.4%
3936047 3153.1.1.0 ↗ a+b two layers › PipX › PipX › PipX 0.51 38.0 4.00e-01 85.3% 91.7%
5014022 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.51 43.0 3.15e-01 100.0% 54.8%
1171414 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.51 40.0 3.13e-01 94.1% 65.9%
3615220 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.50 34.0 2.59e-01 98.5% 27.4%