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IMGVR_UViG_2502082094_000001-2502082094-2502095172
Arc-VirIMGVR_UViG_2502082094_000001-2502082094-2502095172
Identity
- Kingdom:
- archaea
Quality
61.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 250-332
D2
medium
residues 12-91_158-174
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 50.0 | 6.12e-01 | 72.2% | 100.0% |
| 1sfuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 53.0 | 6.12e-01 | 71.1% | 97.1% |
| 1qbjC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 51.0 | 6.09e-01 | 70.1% | 100.0% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.69e-01 | 83.5% | 92.0% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 51.0 | 5.71e-01 | 73.2% | 97.3% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 5.90e-01 | 82.5% | 98.6% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 5.74e-01 | 71.1% | 100.0% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 47.0 | 5.55e-01 | 74.2% | 98.5% |
| 1ku9B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 50.0 | 5.24e-01 | 71.1% | 79.3% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 46.0 | 5.50e-01 | 84.5% | 100.0% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 4.44e-01 | 81.4% | 52.2% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 48.0 | 5.24e-01 | 72.2% | 83.7% |
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 5.37e-01 | 86.6% | 83.9% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 50.0 | 5.60e-01 | 82.5% | 95.9% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.98e-01 | 81.4% | 73.4% |
| 2hs5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 47.0 | 5.46e-01 | 71.1% | 100.0% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 50.0 | 5.54e-01 | 78.4% | 94.7% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 48.0 | 5.37e-01 | 72.2% | 92.0% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 50.0 | 5.38e-01 | 74.2% | 93.8% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 52.0 | 5.54e-01 | 87.6% | 92.7% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 46.0 | 5.37e-01 | 73.2% | 100.0% |
| 3bwgB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 47.0 | 5.42e-01 | 72.2% | 100.0% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 47.0 | 4.64e-01 | 81.4% | 66.3% |
| 2a61B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 48.0 | 4.28e-01 | 82.5% | 51.8% |
| 4ad9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 5.21e-01 | 75.3% | 94.0% |
| 4chuA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 5.01e-01 | 93.8% | 66.7% |
| 1bjtA05 | 3.90.199.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase II; domain 5 › Topoisomerase II, domain 5 | 0.68 | 59.0 | 4.38e-01 | 95.9% | 73.5% |
| 3x1oA00 | 1.20.120.1790 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.68 | 61.0 | 5.28e-01 | 99.0% | 73.2% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 5.36e-01 | 79.4% | 89.3% |
| 1z6tA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 5.20e-01 | 81.4% | 87.1% |
| 3l09A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 50.0 | 5.27e-01 | 78.4% | 96.4% |
| 6e3aA01 | 1.10.10.970 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain | 0.66 | 45.0 | 4.94e-01 | 70.1% | 100.0% |
| 7bqjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 45.0 | 4.87e-01 | 86.6% | 84.0% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.66 | 46.0 | 4.76e-01 | 92.8% | 77.5% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 5.12e-01 | 81.4% | 86.2% |
| 1xmkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 5.43e-01 | 80.4% | 100.0% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.74e-01 | 82.5% | 72.5% |
| 3by6C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 46.0 | 5.03e-01 | 73.2% | 90.9% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.34e-01 | 82.5% | 55.5% |
| 3tqnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 4.98e-01 | 71.1% | 93.2% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 5.00e-01 | 88.7% | 83.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.78e-01 | 80.4% | 76.2% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 46.0 | 5.09e-01 | 76.3% | 97.3% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 5.18e-01 | 87.6% | 88.9% |
| 4tv7D01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 5.16e-01 | 82.5% | 92.9% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.45e-01 | 84.5% | 57.9% |
| 2rkhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 4.94e-01 | 87.6% | 86.4% |
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.64 | 54.0 | 4.86e-01 | 94.8% | 71.0% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.89e-01 | 84.5% | 86.4% |
| 2pbiA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.75e-01 | 81.4% | 91.3% |
| 2ph7A01 | 1.10.3400.10 | Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like | 0.62 | 43.0 | 3.97e-01 | 71.1% | 63.7% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 4.21e-01 | 80.4% | 82.4% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.57 | 41.0 | 4.49e-01 | 99.0% | 96.2% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 4.19e-01 | 87.6% | 83.0% |
| 4bpe700 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 4.38e-01 | 85.6% | 82.2% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 37.0 | 4.02e-01 | 91.8% | 84.8% |
| 7o1rA01 | 1.10.489.10 | Mainly Alpha › Orthogonal Bundle › Chloroperoxidase › Chloroperoxidase-like | 0.54 | 42.0 | 3.38e-01 | 84.5% | 67.8% |
| 7eebI01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 41.0 | 3.44e-01 | 83.5% | 59.8% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 75.0 | 6.30e-01 | 96.9% | 76.0% |
| 3712015 | 101.1.2.53 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mnd1 | 0.81 | 59.0 | 4.99e-01 | 76.3% | 50.3% |
| 3631391 | 101.1.2.53 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mnd1 | 0.78 | 54.0 | 6.27e-01 | 71.1% | 98.6% |
| 3786459 | 101.1.2.53 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mnd1 | 0.78 | 58.0 | 5.05e-01 | 77.3% | 55.0% |
| 3597278 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 59.0 | 6.15e-01 | 79.4% | 87.8% |
| 3272289 | 101.1.2.53 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mnd1 | 0.77 | 59.0 | 5.14e-01 | 79.4% | 55.7% |
| 3571824 | 101.1.2.601 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH | 0.77 | 57.0 | 4.37e-01 | 78.4% | 36.7% |
| 4975936 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.76 | 49.0 | 5.57e-01 | 75.3% | 85.3% |
| 5000849 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 53.0 | 6.12e-01 | 89.7% | 100.0% |
| 3895945 | 101.1.2.53 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mnd1 | 0.76 | 58.0 | 4.75e-01 | 80.4% | 46.7% |
| 3224625 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.75 | 53.0 | 5.85e-01 | 76.3% | 94.7% |
| 3472278 | 101.1.2.206 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH | 0.75 | 51.0 | 5.71e-01 | 71.1% | 100.0% |
| 4969903 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.75 | 50.0 | 5.49e-01 | 81.4% | 83.7% |
| 4032381 | 101.1.2.231 ↗ | alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot | 0.74 | 59.0 | 5.60e-01 | 84.5% | 75.7% |
| 4945981 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 50.0 | 4.36e-01 | 75.3% | 47.9% |
| 4951679 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.74 | 49.0 | 5.36e-01 | 84.5% | 82.5% |
| 5062735 | 101.1.2.32 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rrf2 | 0.73 | 59.0 | 5.10e-01 | 91.8% | 56.6% |
| 3773922 | 101.1.2.82 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP | 0.73 | 54.0 | 4.62e-01 | 76.3% | 51.3% |
| 3588042 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 49.0 | 5.15e-01 | 70.1% | 74.4% |
| 4993543 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 51.0 | 5.39e-01 | 83.5% | 81.2% |
| 5029837 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 53.0 | 5.70e-01 | 83.5% | 87.1% |
| 4971669 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 56.0 | 4.83e-01 | 80.4% | 61.4% |
| 5052149 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 52.0 | 5.44e-01 | 75.3% | 100.0% |
| 3243170 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 52.0 | 5.72e-01 | 84.5% | 91.3% |
| 5041695 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.72 | 48.0 | 5.50e-01 | 82.5% | 92.9% |
| 3667030 | 101.1.2.466 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C | 0.72 | 52.0 | 5.73e-01 | 75.3% | 94.9% |
| 3677397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 52.0 | 3.25e-01 | 75.3% | 14.7% |
| 3280481 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.72 | 51.0 | 5.69e-01 | 75.3% | 96.0% |
| 5077357 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.72 | 49.0 | 4.76e-01 | 75.3% | 63.8% |
| 5078641 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.72 | 55.0 | 6.07e-01 | 88.7% | 100.0% |
| 2390055 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.71 | 52.0 | 5.64e-01 | 77.3% | 93.7% |
| 5004095 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.71 | 54.0 | 5.77e-01 | 92.8% | 91.8% |
| 4981509 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.71 | 48.0 | 5.57e-01 | 74.2% | 95.7% |
| 4483341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 55.0 | 5.24e-01 | 92.8% | 69.6% |
| 4009064 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.71 | 52.0 | 5.64e-01 | 78.4% | 92.5% |
| 3404571 | 101.1.2.206 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH | 0.71 | 49.0 | 5.33e-01 | 71.1% | 95.0% |
| 3281935 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.71 | 51.0 | 5.65e-01 | 77.3% | 97.3% |
| 3268630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 54.0 | 5.45e-01 | 79.4% | 82.1% |
| 3716370 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 49.0 | 5.24e-01 | 72.2% | 95.3% |
| 3473498 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 50.0 | 5.34e-01 | 74.2% | 97.6% |
| 4991174 | 101.1.2.63 ↗ | alpha arrays › HTH › HTH › winged helix domain › FaeA | 0.70 | 52.0 | 5.82e-01 | 78.4% | 100.0% |
| 4022486 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.70 | 54.0 | 5.64e-01 | 82.5% | 92.2% |
| 4997094 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 48.0 | 4.83e-01 | 81.4% | 69.0% |
| 5055112 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.70 | 50.0 | 5.10e-01 | 81.4% | 75.8% |
| 4941358 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 49.0 | 5.39e-01 | 81.4% | 87.5% |
| 5044288 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 51.0 | 5.52e-01 | 76.3% | 100.0% |
| 3279756 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.70 | 52.0 | 4.59e-01 | 78.4% | 55.7% |
| 5070584 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.70 | 53.0 | 5.49e-01 | 82.5% | 86.7% |
| 3286901 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.69 | 51.0 | 4.92e-01 | 77.3% | 74.5% |
| 2601 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.69 | 52.0 | 5.54e-01 | 87.6% | 92.7% |
| 4991175 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 51.0 | 5.33e-01 | 87.6% | 84.4% |
| 4987121 | 101.1.2.650 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7343 | 0.69 | 48.0 | 4.74e-01 | 76.3% | 66.7% |
| 5055754 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 53.0 | 5.21e-01 | 82.5% | 76.2% |
| 4994269 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.69 | 51.0 | 5.39e-01 | 76.3% | 95.3% |
| 4952882 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 49.0 | 5.27e-01 | 73.2% | 97.5% |
| 2602 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.69 | 50.0 | 4.67e-01 | 80.4% | 60.7% |
| 3489856 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 50.0 | 5.41e-01 | 76.3% | 98.8% |
| 3169812 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.69 | 50.0 | 4.22e-01 | 76.3% | 55.6% |
| 3222445 | 148.1.3.41 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C | 0.68 | 47.0 | 5.36e-01 | 87.6% | 100.0% |
| 5056233 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 52.0 | 5.40e-01 | 81.4% | 85.6% |
| 5027877 | 101.1.2.82 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP | 0.68 | 51.0 | 5.58e-01 | 82.5% | 95.0% |
| 3587913 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.68 | 50.0 | 4.53e-01 | 80.4% | 56.9% |
| 4015092 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 47.0 | 5.34e-01 | 87.6% | 100.0% |
| 3577481 | 101.1.2.416 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Egal | 0.68 | 52.0 | 4.44e-01 | 81.4% | 95.6% |
| 2417725 | 101.1.2.467 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_Rok | 0.68 | 50.0 | 4.98e-01 | 78.4% | 75.7% |
| 3264668 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.68 | 48.0 | 5.32e-01 | 74.2% | 100.0% |
| 4956137 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 48.0 | 4.98e-01 | 74.2% | 81.1% |
| 4968041 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.67 | 54.0 | 4.67e-01 | 84.5% | 97.9% |
| 5013516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 5.03e-01 | 82.5% | 78.9% |
| 4946699 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 5.28e-01 | 80.4% | 86.5% |
| 3785068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 5.48e-01 | 86.6% | 100.0% |
| 4998550 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 49.0 | 5.52e-01 | 79.4% | 100.0% |
| 4927412 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 52.0 | 5.50e-01 | 86.6% | 94.1% |
| 3962953 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.67 | 50.0 | 4.78e-01 | 79.4% | 68.7% |
| 3957917 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.67 | 52.0 | 5.50e-01 | 93.8% | 96.5% |
| 4032512 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.66 | 48.0 | 5.19e-01 | 79.4% | 92.5% |
| 3232527 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 49.0 | 4.83e-01 | 79.4% | 93.3% |
| 3454577 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.66 | 50.0 | 3.43e-01 | 86.6% | 23.2% |
| 4960116 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 5.45e-01 | 88.7% | 91.1% |
| 5003985 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.65 | 52.0 | 4.64e-01 | 84.5% | 67.4% |
| 3968658 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.65 | 44.0 | 4.76e-01 | 71.1% | 85.0% |
| 5081804 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.64 | 44.0 | 4.88e-01 | 89.7% | 90.7% |
| 4990337 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 45.0 | 4.72e-01 | 86.6% | 80.0% |
| 3786023 | 101.1.2.154 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1_C | 0.64 | 56.0 | 4.26e-01 | 100.0% | 45.0% |
| 4486952 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.63 | 49.0 | 3.17e-01 | 84.5% | 17.1% |
| 5063930 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 48.0 | 4.96e-01 | 81.4% | 90.0% |
| 4936864 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 50.0 | 5.04e-01 | 88.7% | 88.4% |
| 4344454 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.62 | 46.0 | 3.58e-01 | 82.5% | 35.2% |
| 5049027 | 101.1.2.898 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fer4_9 | 0.61 | 55.0 | 4.62e-01 | 99.0% | 81.2% |
| 5046890 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 49.0 | 4.32e-01 | 86.6% | 61.4% |
| 5042497 | 101.1.2.37 ↗ | alpha arrays › HTH › HTH › winged helix domain › E2F_TDP | 0.60 | 51.0 | 5.17e-01 | 89.7% | 97.9% |
| 1410173 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.58 | 46.0 | 4.16e-01 | 85.6% | 85.8% |
D3
medium
residues 92-157
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1em2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 55.0 | 3.90e-01 | 98.5% | 80.8% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.62 | 37.0 | 3.43e-01 | 84.8% | 45.8% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.60 | 37.0 | 4.28e-01 | 71.2% | 89.1% |
| 2q0xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 41.0 | 2.74e-01 | 98.5% | 17.8% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 47.0 | 3.12e-01 | 97.0% | 37.0% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 45.0 | 4.24e-01 | 100.0% | 71.6% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 3.03e-01 | 98.5% | 22.1% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.55 | 40.0 | 3.40e-01 | 92.4% | 44.0% |
| 3p0lD00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 44.0 | 3.26e-01 | 93.9% | 79.5% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 43.0 | 3.20e-01 | 90.9% | 60.7% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 44.0 | 3.39e-01 | 95.5% | 73.6% |
| 3oguA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 40.0 | 3.37e-01 | 84.8% | 88.6% |
| 3tw6D02 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.52 | 32.0 | 3.13e-01 | 84.8% | 53.9% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 34.0 | 3.26e-01 | 89.4% | 57.7% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 3.43e-01 | 83.3% | 69.8% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.50 | 32.0 | 2.51e-01 | 71.2% | 31.6% |
| 1st8A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.50 | 43.0 | 3.18e-01 | 100.0% | 39.5% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.50 | 35.0 | 3.30e-01 | 84.8% | 57.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 72.0 | 5.34e-01 | 93.9% | 40.0% |
| 3443030 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 53.0 | 5.01e-01 | 97.0% | 76.2% |
| 4155387 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.60 | 43.0 | 2.78e-01 | 75.8% | 61.3% |
| 3283724 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.59 | 51.0 | 4.53e-01 | 98.5% | 67.4% |
| 3972102 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.59 | 36.0 | 3.11e-01 | 77.3% | 40.0% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.57 | 35.0 | 3.27e-01 | 77.3% | 48.2% |
| 3439312 | 3209.1.1.1 ↗ | a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e | 0.55 | 41.0 | 3.83e-01 | 90.9% | 62.2% |
| 5053568 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 45.0 | 3.66e-01 | 97.0% | 45.9% |
| 3690375 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.55 | 41.0 | 3.29e-01 | 93.9% | 38.6% |
| 3704402 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 43.0 | 3.68e-01 | 93.9% | 53.0% |
| 4002681 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.53 | 37.0 | 3.37e-01 | 81.8% | 53.3% |
| 4569662 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.53 | 37.0 | 2.44e-01 | 75.8% | 84.5% |
| 4996738 | 2484.1.1.291 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_V | 0.52 | 37.0 | 2.12e-01 | 90.9% | 7.1% |
| 4203354 | 252.2.1.9 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › PF27551 | 0.52 | 43.0 | 3.85e-01 | 97.0% | 65.3% |
| 5059099 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.51 | 43.0 | 4.00e-01 | 98.5% | 76.1% |
| None | — | 0.51 | 37.0 | 2.13e-01 | 77.3% | 26.5% | |
| 3395366 | 11.1.1.938 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GD_N | 0.51 | 41.0 | 3.49e-01 | 90.9% | 75.7% |
| 3935018 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.51 | 39.0 | 3.76e-01 | 87.9% | 92.5% |
| 3322003 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 43.0 | 2.73e-01 | 98.5% | 48.3% |
| 3990141 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 41.0 | 2.68e-01 | 95.5% | 46.6% |
| 3408147 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 41.0 | 2.85e-01 | 93.9% | 64.4% |