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IMGVR_UViG_2502082094_000001-2502082094-2502095214
Arc-VirIMGVR_UViG_2502082094_000001-2502082094-2502095214
Identity
- Kingdom:
- archaea
Quality
54.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-131
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b5iA02 | 1.10.1200.220 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.67 | 49.0 | 4.65e-01 | 76.8% | 92.6% |
| 2hdoA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 33.0 | 3.62e-01 | 96.3% | 62.5% |
| 4p1eA00 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.61 | 42.0 | 2.90e-01 | 72.0% | 83.1% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.59 | 36.0 | 3.50e-01 | 87.8% | 52.1% |
| 1ztdA00 | 1.10.1520.20 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III | 0.59 | 42.0 | 3.71e-01 | 75.6% | 94.4% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 42.0 | 4.22e-01 | 75.6% | 98.8% |
| 2f1kC02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.58 | 40.0 | 3.62e-01 | 70.7% | 93.8% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 39.0 | 4.11e-01 | 97.6% | 79.5% |
| 1lxlA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.57 | 47.0 | 3.47e-01 | 91.5% | 87.8% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.57 | 42.0 | 3.68e-01 | 80.5% | 50.4% |
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 44.0 | 3.04e-01 | 85.4% | 24.0% |
| 1ax8A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 43.0 | 3.67e-01 | 81.7% | 86.2% |
| 1l5aA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.56 | 39.0 | 3.07e-01 | 75.6% | 83.1% |
| 2wzfA01 | 1.10.1740.130 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.55 | 49.0 | 4.53e-01 | 100.0% | 94.2% |
| 6o9aA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 38.0 | 3.25e-01 | 75.6% | 78.1% |
| 1tdzA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 47.0 | 4.08e-01 | 100.0% | 76.9% |
| 1c1kA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 38.0 | 3.61e-01 | 93.9% | 60.8% |
| 7wj9A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 39.0 | 2.67e-01 | 76.8% | 95.8% |
| 2wjwA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 48.0 | 3.59e-01 | 100.0% | 84.4% |
| 3hzrA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.53 | 41.0 | 3.68e-01 | 81.7% | 82.9% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 43.0 | 3.46e-01 | 89.0% | 53.5% |
| 2or0B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.52 | 32.0 | 2.88e-01 | 79.3% | 39.5% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 44.0 | 3.68e-01 | 95.1% | 84.2% |
| 1lb3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 41.0 | 3.29e-01 | 86.6% | 83.8% |
| 5u1aL00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 42.0 | 3.35e-01 | 89.0% | 50.6% |
| 6me6B02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 44.0 | 3.08e-01 | 97.6% | 34.3% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 45.0 | 3.80e-01 | 98.8% | 87.1% |
| 3k3fA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.51 | 46.0 | 3.04e-01 | 100.0% | 36.7% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.51 | 39.0 | 3.04e-01 | 81.7% | 60.5% |
| 2pg4A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 32.0 | 3.17e-01 | 93.9% | 58.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3227958 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.64 | 48.0 | 3.94e-01 | 81.7% | 81.3% |
| 4011529 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 4.68e-01 | 100.0% | 93.6% |
| 4955306 | 1188.1.1.3 ↗ | alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Mntp | 0.60 | 46.0 | 3.66e-01 | 82.9% | 69.4% |
| 3511398 | 101.1.2.106 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 | 0.59 | 45.0 | 3.72e-01 | 82.9% | 82.6% |
| 4934634 | 2003.1.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog | 0.59 | 54.0 | 3.75e-01 | 100.0% | 85.5% |
| 5028959 | 2003.1.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog | 0.58 | 53.0 | 3.78e-01 | 100.0% | 88.3% |
| 5076588 | 2003.1.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog | 0.58 | 51.0 | 3.61e-01 | 95.1% | 89.1% |
| 4981207 | 2003.1.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog | 0.56 | 50.0 | 3.59e-01 | 98.8% | 88.3% |
| 4979277 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.56 | 50.0 | 3.62e-01 | 98.8% | 89.6% |
| 4931061 | 2003.1.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ELFV_dehydrog | 0.55 | 49.0 | 3.56e-01 | 98.8% | 88.1% |
| 3965290 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.55 | 41.0 | 3.16e-01 | 79.3% | 74.1% |
| 4948156 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.55 | 45.0 | 3.27e-01 | 90.2% | 84.1% |
| 4503189 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.55 | 47.0 | 3.65e-01 | 93.9% | 61.1% |
| 363971 | 101.1.4.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou | 0.54 | 45.0 | 4.52e-01 | 92.7% | 90.7% |
| 4182984 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.54 | 42.0 | 3.81e-01 | 82.9% | 80.0% |
| 4661100 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.53 | 41.0 | 4.16e-01 | 97.6% | 87.5% |
| 4182983 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.53 | 39.0 | 3.53e-01 | 78.0% | 82.7% |
| 3205824 | 5050.1.1.15 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nodulin-like | 0.52 | 43.0 | 3.14e-01 | 91.5% | 47.7% |
| 4304766 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.52 | 42.0 | 3.51e-01 | 86.6% | 83.6% |
| 4954611 | 1079.1.1.19 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DUF2162 | 0.52 | 45.0 | 3.47e-01 | 97.6% | 77.4% |
| None | — | 0.52 | 46.0 | 3.16e-01 | 97.6% | 29.5% | |
| 3967691 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 35.0 | 2.54e-01 | 72.0% | 41.2% |