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IMGVR_UViG_2502082094_000001-2502082094-2502095219
Arc-VirIMGVR_UViG_2502082094_000001-2502082094-2502095219
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-110
Domain cluster:
rep: aot2015-NO19_SRR1761693_USA_trim_clean_trim_clean_scaffold_5_curated_closed_complete_reversed_prodigal-single.1__X__X__00183__D36-131
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b12C01 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.80 | 74.0 | 6.96e-01 | 97.1% | 83.5% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 46.0 | 5.63e-01 | 93.3% | 100.0% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 51.0 | 4.64e-01 | 70.2% | 83.3% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.73 | 50.0 | 3.99e-01 | 70.2% | 76.5% |
| 5z8lA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.72 | 50.0 | 4.73e-01 | 71.2% | 86.6% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 48.0 | 5.65e-01 | 93.3% | 98.6% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.71 | 49.0 | 4.37e-01 | 71.2% | 75.9% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.71 | 48.0 | 4.24e-01 | 70.2% | 70.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 44.0 | 5.38e-01 | 92.3% | 100.0% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 49.0 | 4.68e-01 | 71.2% | 87.2% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 48.0 | 5.08e-01 | 73.1% | 100.0% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.67 | 47.0 | 4.27e-01 | 73.1% | 75.2% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 49.0 | 5.49e-01 | 92.3% | 100.0% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.66 | 52.0 | 5.25e-01 | 94.2% | 83.7% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 3.96e-01 | 73.1% | 49.7% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 44.0 | 5.11e-01 | 88.5% | 100.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 37.0 | 4.68e-01 | 82.7% | 98.4% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.63 | 50.0 | 4.95e-01 | 94.2% | 80.7% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 43.0 | 4.94e-01 | 78.8% | 97.3% |
| 2vgmA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.59 | 52.0 | 4.93e-01 | 96.2% | 80.3% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.59 | 42.0 | 4.43e-01 | 91.3% | 84.6% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.57 | 50.0 | 4.70e-01 | 95.2% | 83.5% |
| 4hntA04 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.55 | 33.0 | 3.38e-01 | 85.6% | 60.4% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 34.0 | 3.39e-01 | 70.2% | 60.4% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4565837 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.94 | 83.0 | 8.71e-01 | 100.0% | 100.0% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.93 | 82.0 | 8.26e-01 | 96.2% | 90.5% |
| 5038570 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.93 | 80.0 | 7.57e-01 | 94.2% | 77.5% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.92 | 83.0 | 8.13e-01 | 100.0% | 88.2% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.90 | 74.0 | 7.99e-01 | 94.2% | 98.9% |
| 5012425 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.87 | 83.0 | 7.36e-01 | 100.0% | 88.6% |
| 5055039 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.86 | 83.0 | 7.31e-01 | 100.0% | 75.7% |
| 4947612 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.84 | 81.0 | 7.19e-01 | 100.0% | 78.6% |
| 4932404 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.84 | 81.0 | 6.79e-01 | 100.0% | 81.9% |
| 4956630 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.84 | 81.0 | 6.85e-01 | 100.0% | 69.7% |
| 5037849 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.84 | 78.0 | 7.20e-01 | 100.0% | 80.0% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.84 | 81.0 | 7.36e-01 | 100.0% | 84.6% |
| 5017073 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.83 | 80.0 | 6.87e-01 | 100.0% | 70.7% |
| 4929262 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.83 | 79.0 | 6.75e-01 | 100.0% | 68.4% |
| 5050716 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.82 | 79.0 | 7.12e-01 | 100.0% | 82.2% |
| 3615426 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.82 | 79.0 | 6.79e-01 | 100.0% | 71.3% |
| 3603079 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.82 | 77.0 | 6.48e-01 | 98.1% | 98.8% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.82 | 78.0 | 6.65e-01 | 100.0% | 67.7% |
| 3301326 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.81 | 76.0 | 6.03e-01 | 100.0% | 61.0% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.81 | 77.0 | 6.48e-01 | 100.0% | 78.1% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.80 | 77.0 | 6.79e-01 | 100.0% | 76.4% |
| 4938445 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.79 | 75.0 | 6.72e-01 | 100.0% | 75.6% |
| 3523144 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.76 | 52.0 | 4.20e-01 | 70.2% | 92.1% |
| None | — | 0.75 | 52.0 | 4.18e-01 | 71.2% | 56.5% | |
| 3167531 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.73 | 50.0 | 4.59e-01 | 70.2% | 80.7% |
| 3272197 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 49.0 | 4.96e-01 | 71.2% | 77.1% |
| 3184235 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.71 | 49.0 | 4.36e-01 | 71.2% | 74.5% |
| 3932647 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.70 | 51.0 | 5.53e-01 | 91.3% | 91.8% |
| 5058103 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 43.0 | 5.13e-01 | 73.1% | 94.1% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.69 | 45.0 | 5.26e-01 | 70.2% | 92.0% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.69 | 45.0 | 5.24e-01 | 70.2% | 92.0% |
| 3437797 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.69 | 62.0 | 4.63e-01 | 97.1% | 90.8% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.69 | 49.0 | 4.68e-01 | 73.1% | 85.8% |
| 4118552 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 48.0 | 5.51e-01 | 97.1% | 100.0% |
| 4354770 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 43.0 | 5.16e-01 | 73.1% | 95.7% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.68 | 46.0 | 4.97e-01 | 70.2% | 100.0% |
| 3940730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 52.0 | 5.46e-01 | 89.4% | 88.4% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.67 | 47.0 | 5.12e-01 | 72.1% | 88.2% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.66 | 46.0 | 3.63e-01 | 72.1% | 34.9% |
| 3393358 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 51.0 | 5.32e-01 | 90.4% | 88.4% |
| 3511007 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.66 | 44.0 | 4.23e-01 | 71.2% | 59.2% |
| 3631313 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.66 | 46.0 | 3.76e-01 | 72.1% | 51.1% |
| 608 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.66 | 52.0 | 5.25e-01 | 94.2% | 83.7% |
| 4250193 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.65 | 48.0 | 5.09e-01 | 96.2% | 87.8% |
| 3720660 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 5.11e-01 | 91.3% | 97.3% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 45.0 | 5.18e-01 | 93.3% | 100.0% |
| 3505711 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.64 | 44.0 | 4.80e-01 | 70.2% | 85.9% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 5.05e-01 | 96.2% | 100.0% |
| 3594413 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 46.0 | 5.16e-01 | 95.2% | 98.8% |
| 4427477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 52.0 | 5.39e-01 | 89.4% | 95.8% |
| 4954224 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.62 | 51.0 | 5.34e-01 | 96.2% | 95.8% |
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 48.0 | 4.86e-01 | 91.3% | 83.8% |
| 4565130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 49.0 | 5.10e-01 | 88.5% | 95.8% |
| 4358168 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 41.0 | 4.10e-01 | 72.1% | 70.0% |
| 609 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.58 | 53.0 | 5.00e-01 | 98.1% | 85.2% |
| 4022025 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.55 | 47.0 | 4.29e-01 | 98.1% | 93.8% |
| 3608562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 45.0 | 3.92e-01 | 91.3% | 66.0% |
| 3986600 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.51 | 45.0 | 4.20e-01 | 98.1% | 91.5% |
D2
medium
residues 122-154
Domain cluster:
representative