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IMGVR_UViG_2502082094_000001-2502082094-2502095301
Arc-VirIMGVR_UViG_2502082094_000001-2502082094-2502095301
Identity
- Kingdom:
- archaea
Quality
58.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-186
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a0uB01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.60 | 36.0 | 3.80e-01 | 77.1% | 65.6% |
| 7ccmB01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 38.0 | 4.21e-01 | 81.0% | 88.1% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.55 | 33.0 | 4.06e-01 | 74.9% | 96.4% |
| 2j9wB00 | 1.20.120.1130 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain | 0.53 | 27.0 | 3.52e-01 | 96.6% | 87.9% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 31.0 | 3.81e-01 | 93.9% | 93.0% |
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.51 | 36.0 | 3.92e-01 | 72.6% | 92.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978855 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 43.0 | 5.29e-01 | 73.2% | 94.2% |
| 2808456 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.64 | 38.0 | 4.72e-01 | 78.2% | 96.3% |
| 5071468 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 37.0 | 4.39e-01 | 77.1% | 88.8% |
| 4310321 | 532.2.1.1 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ | 0.59 | 31.0 | 4.16e-01 | 78.8% | 96.8% |
| 3194871 | 186.1.1.17 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Arb1 | 0.58 | 36.0 | 4.25e-01 | 72.1% | 91.7% |
| 3259311 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 27.0 | 3.71e-01 | 76.0% | 91.1% |
| 3386834 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 35.0 | 4.22e-01 | 72.1% | 95.0% |
| 3268562 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.50 | 39.0 | 4.16e-01 | 79.9% | 99.3% |
D2
high
residues 274-381