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IMGVR_UViG_2502082094_000002-2502082094-2502095577
Arc-VirIMGVR_UViG_2502082094_000002-2502082094-2502095577
Identity
- Kingdom:
- archaea
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-140
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 38.0 | 4.41e-01 | 92.2% | 80.7% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.64 | 41.0 | 4.86e-01 | 92.2% | 97.4% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 52.0 | 4.53e-01 | 88.8% | 86.0% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 40.0 | 4.48e-01 | 91.4% | 80.9% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 55.0 | 5.10e-01 | 97.4% | 80.3% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 53.0 | 4.92e-01 | 93.1% | 93.0% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 53.0 | 5.16e-01 | 94.0% | 96.8% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 54.0 | 5.25e-01 | 95.7% | 96.8% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 33.0 | 4.14e-01 | 95.7% | 89.9% |
| 3fn5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.60 | 49.0 | 4.40e-01 | 87.9% | 92.0% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 51.0 | 4.77e-01 | 94.0% | 91.8% |
| 2furB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 52.0 | 4.40e-01 | 94.8% | 75.8% |
| 3i6uA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 38.0 | 4.32e-01 | 89.7% | 86.2% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 33.0 | 4.02e-01 | 94.8% | 85.3% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.59 | 46.0 | 4.18e-01 | 84.5% | 84.8% |
| 2w1kA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.57 | 49.0 | 4.10e-01 | 97.4% | 88.5% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 4.35e-01 | 84.5% | 93.2% |
| 6yllA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 37.0 | 4.27e-01 | 87.9% | 98.8% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.55 | 44.0 | 4.08e-01 | 87.1% | 93.9% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.53 | 46.0 | 3.81e-01 | 96.6% | 95.7% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.04e-01 | 88.8% | 86.9% |
| 7zgmA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 44.0 | 3.56e-01 | 95.7% | 82.4% |
| 6td3B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 38.0 | 4.00e-01 | 93.1% | 86.4% |
| 4dqlB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 40.0 | 4.12e-01 | 81.9% | 91.7% |
| 1lmiA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 4.12e-01 | 92.2% | 93.1% |
| 3bvxA05 | 2.60.40.1360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.99e-01 | 75.0% | 100.0% |
| 3vm7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 35.0 | 3.79e-01 | 90.5% | 84.7% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 38.0 | 3.81e-01 | 80.2% | 87.7% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.51 | 41.0 | 3.29e-01 | 89.7% | 70.2% |
| 4c57B00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 45.0 | 3.33e-01 | 100.0% | 59.4% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 58.0 | 5.57e-01 | 84.5% | 100.0% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.72 | 59.0 | 6.17e-01 | 94.8% | 96.2% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.71 | 60.0 | 5.31e-01 | 90.5% | 88.6% |
| 3967003 | 1.1.13.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11 | 0.71 | 57.0 | 5.37e-01 | 85.3% | 99.3% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.68 | 55.0 | 5.00e-01 | 87.9% | 98.8% |
| 4646862 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.68 | 56.0 | 5.77e-01 | 95.7% | 94.5% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 50.0 | 5.45e-01 | 77.6% | 100.0% |
| 4902667 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.65 | 56.0 | 4.80e-01 | 94.0% | 84.0% |
| 5020511 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.62 | 33.0 | 3.33e-01 | 88.8% | 49.6% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.61 | 52.0 | 4.25e-01 | 94.8% | 71.4% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.60 | 51.0 | 4.66e-01 | 94.0% | 88.4% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.60 | 50.0 | 4.81e-01 | 90.5% | 93.8% |
| 4988254 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.59 | 51.0 | 4.41e-01 | 94.8% | 78.3% |
| 4135582 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.59 | 48.0 | 4.07e-01 | 87.9% | 84.7% |
| 4373808 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.59 | 46.0 | 4.71e-01 | 83.6% | 95.5% |
| 4650190 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.58 | 44.0 | 3.45e-01 | 81.9% | 44.2% |
| 3599730 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.57 | 41.0 | 4.08e-01 | 75.0% | 90.0% |
| 169822 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.57 | 49.0 | 4.10e-01 | 97.4% | 88.5% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.57 | 41.0 | 4.53e-01 | 97.4% | 96.7% |
| 3185466 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.57 | 41.0 | 3.44e-01 | 97.4% | 44.0% |
| 3213392 | 389.1.2.19 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › DUF281 | 0.56 | 35.0 | 3.87e-01 | 75.9% | 76.8% |
| 5027270 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.56 | 47.0 | 4.17e-01 | 94.0% | 97.7% |
| 3277757 | 4.1.1.234 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2469 | 0.55 | 32.0 | 3.58e-01 | 85.3% | 73.3% |
| 153599 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.55 | 44.0 | 4.08e-01 | 87.1% | 93.9% |
| 3289852 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 46.0 | 3.90e-01 | 92.2% | 78.2% |
| 4954224 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.54 | 37.0 | 4.01e-01 | 95.7% | 85.3% |
| 3614830 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 49.0 | 3.64e-01 | 100.0% | 64.8% |
| 2900289 | 12.3.1.28 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N | 0.53 | 45.0 | 3.66e-01 | 94.0% | 85.8% |
| 4214302 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.53 | 41.0 | 3.37e-01 | 81.9% | 47.7% |
| 3369437 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.52 | 40.0 | 3.16e-01 | 81.9% | 38.0% |
| 5023934 | 4160.1.1.3 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › PF26233 | 0.52 | 44.0 | 3.75e-01 | 94.0% | 98.5% |
| 4310932 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.52 | 44.0 | 3.49e-01 | 94.8% | 79.2% |
| 3928764 | 11.1.1.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON | 0.52 | 41.0 | 4.30e-01 | 83.6% | 96.2% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 37.0 | 4.03e-01 | 80.2% | 91.6% |
| 3391409 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 4.07e-01 | 97.4% | 88.4% |
| 3251961 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.51 | 42.0 | 3.35e-01 | 88.8% | 94.5% |
| 3259730 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.51 | 42.0 | 4.29e-01 | 88.8% | 96.4% |
| 3903479 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 45.0 | 3.35e-01 | 100.0% | 55.0% |
| 3447797 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.50 | 45.0 | 4.17e-01 | 100.0% | 94.0% |
| 3536437 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 31.0 | 2.90e-01 | 97.4% | 48.3% |