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IMGVR_UViG_2502082094_000002-2502082094-2502095589
Arc-VirIMGVR_UViG_2502082094_000002-2502082094-2502095589
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-79
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qmgC01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 63.0 | 4.81e-01 | 100.0% | 43.4% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 39.0 | 4.11e-01 | 95.8% | 62.5% |
| 1jnrB02 | 6.20.260.10 | Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain | 0.63 | 34.0 | 3.26e-01 | 79.2% | 43.4% |
| 4gyiA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 38.0 | 3.42e-01 | 83.3% | 45.9% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 3.90e-01 | 94.4% | 48.0% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 38.0 | 4.10e-01 | 100.0% | 86.2% |
| 2nutA03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.56 | 46.0 | 3.20e-01 | 91.7% | 38.6% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 48.0 | 4.15e-01 | 100.0% | 91.5% |
| 2l2fA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.55 | 49.0 | 4.31e-01 | 100.0% | 84.3% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.55 | 48.0 | 4.24e-01 | 100.0% | 88.9% |
| 2zgyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 46.0 | 3.48e-01 | 95.8% | 79.4% |
| 1mbyA00 | 2.40.50.930 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 45.0 | 4.45e-01 | 100.0% | 93.3% |
| 1bdgA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 42.0 | 3.26e-01 | 91.7% | 38.4% |
| 1ig8A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 43.0 | 3.56e-01 | 90.3% | 50.7% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.09e-01 | 100.0% | 45.6% |
| 7d58G02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 3.79e-01 | 100.0% | 65.3% |
| 4bg8A01 | 3.30.420.430 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 41.0 | 3.48e-01 | 91.7% | 49.6% |
| 3cetB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 41.0 | 3.69e-01 | 94.4% | 78.2% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 41.0 | 3.41e-01 | 90.3% | 50.4% |
| 6r2nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 42.0 | 3.43e-01 | 93.1% | 47.9% |
| 1x5mA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 38.0 | 3.39e-01 | 100.0% | 55.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738104 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.77 | 72.0 | 5.35e-01 | 100.0% | 45.5% |
| 3634014 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.77 | 64.0 | 5.08e-01 | 100.0% | 45.7% |
| 3599041 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.72 | 65.0 | 5.16e-01 | 100.0% | 50.3% |
| 3609631 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.72 | 66.0 | 5.12e-01 | 100.0% | 48.7% |
| 4026269 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.72 | 65.0 | 5.21e-01 | 100.0% | 51.4% |
| 4218488 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 39.0 | 3.79e-01 | 97.2% | 51.2% |
| 3404859 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.61 | 36.0 | 4.00e-01 | 88.9% | 76.4% |
| 4502878 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.59 | 39.0 | 4.20e-01 | 100.0% | 81.7% |
| 3504193 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.57 | 41.0 | 3.39e-01 | 95.8% | 41.5% |
| 3534391 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 46.0 | 3.54e-01 | 95.8% | 67.4% |
| 1110902 | 3758.1.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Bacillus_HBL | 0.56 | 45.0 | 2.93e-01 | 88.9% | 67.9% |
| 3415928 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.56 | 34.0 | 3.63e-01 | 87.5% | 71.7% |
| 5051694 | 218.4.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 | 0.55 | 45.0 | 3.90e-01 | 87.5% | 96.4% |
| 4832853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 3.55e-01 | 97.2% | 64.0% |
| 3289877 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.54 | 33.0 | 3.66e-01 | 91.7% | 84.0% |
| 3695678 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.54 | 44.0 | 2.72e-01 | 93.1% | 14.8% |
| 4314572 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.54 | 43.0 | 3.90e-01 | 100.0% | 64.0% |
| 4255589 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.54 | 41.0 | 3.75e-01 | 100.0% | 62.0% |
| 4013625 | 3417.1.1.0 ↗ | a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain | 0.52 | 29.0 | 3.14e-01 | 88.9% | 62.7% |
| 4927204 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 32.0 | 3.01e-01 | 91.7% | 51.1% |
| 4588452 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 33.0 | 3.41e-01 | 100.0% | 67.1% |
| 4077485 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 34.0 | 3.54e-01 | 100.0% | 75.4% |
| 4027676 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.80e-01 | 100.0% | 24.9% |
| 4200272 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.51 | 42.0 | 4.01e-01 | 94.4% | 96.7% |
| 4985980 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.51 | 44.0 | 3.08e-01 | 95.8% | 50.8% |
| 4980468 | 2484.1.1.338 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family10 | 0.51 | 42.0 | 3.54e-01 | 95.8% | 51.5% |
| 3723377 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.51 | 41.0 | 3.42e-01 | 87.5% | 88.0% |
| 5072826 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.50 | 43.0 | 4.00e-01 | 93.1% | 94.4% |
| 5068447 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.50 | 41.0 | 3.45e-01 | 95.8% | 51.5% |