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IMGVR_UViG_2504557010_000001-2504557010-2504600413
Arc-VirIMGVR_UViG_2504557010_000001-2504557010-2504600413
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-109
Domain cluster:
rep: MT047590__QIM61631.1__X__00026__D12-94
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22415.2 best | PSV_ORF131-like_dom | 131.3 | 1.40e-38 | 89.0% | 97.5% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.83 | 76.0 | 7.61e-01 | 100.0% | 98.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 38.0 | 4.32e-01 | 82.4% | 87.9% |
| 2k0mA00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 3.86e-01 | 70.3% | 73.1% |
| 3e8tA00 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.57 | 44.0 | 3.44e-01 | 85.7% | 69.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.57 | 38.0 | 4.42e-01 | 72.5% | 100.0% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 4.25e-01 | 76.9% | 100.0% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 4.16e-01 | 80.2% | 96.8% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 4.19e-01 | 89.0% | 94.1% |
| 2b4wA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 43.0 | 3.07e-01 | 83.5% | 84.5% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 34.0 | 3.81e-01 | 71.4% | 77.8% |
| 3weeA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 40.0 | 3.15e-01 | 74.7% | 87.4% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 34.0 | 3.99e-01 | 75.8% | 98.2% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 32.0 | 3.77e-01 | 70.3% | 92.6% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 44.0 | 3.12e-01 | 87.9% | 72.3% |
| 3vb0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 29.0 | 2.45e-01 | 78.0% | 30.0% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 3.09e-01 | 87.9% | 98.9% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 37.0 | 3.91e-01 | 75.8% | 84.6% |
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.53 | 38.0 | 2.98e-01 | 74.7% | 73.8% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 35.0 | 3.92e-01 | 70.3% | 91.4% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 33.0 | 3.03e-01 | 97.8% | 49.2% |
| 6qm7M00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.51 | 41.0 | 3.21e-01 | 91.2% | 93.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 396031 | 4.22.1.1 ↗ | beta barrels › SH3 › Hypothetical protein ORF131 › Hypothetical protein ORF131 › PSV_ORF131-like_dom | 0.82 | 76.0 | 7.34e-01 | 100.0% | 90.1% |
| 4934744 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.65 | 52.0 | 3.55e-01 | 87.9% | 56.9% |
| 4380609 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.64 | 43.0 | 2.74e-01 | 97.8% | 14.3% |
| 5016556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.82e-01 | 80.2% | 93.3% |
| 3432156 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.62 | 37.0 | 4.68e-01 | 87.9% | 100.0% |
| 3722450 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.61 | 46.0 | 3.95e-01 | 80.2% | 97.2% |
| 4206684 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.61 | 39.0 | 4.47e-01 | 80.2% | 92.3% |
| 5028909 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.60 | 50.0 | 3.17e-01 | 92.3% | 60.8% |
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 4.55e-01 | 76.9% | 100.0% |
| 4072405 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.59 | 40.0 | 4.30e-01 | 81.3% | 85.3% |
| 4186983 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.59 | 40.0 | 4.28e-01 | 81.3% | 85.3% |
| 184706 | 3556.1.1.1 ↗ | a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 | 0.58 | 40.0 | 3.86e-01 | 70.3% | 73.1% |
| 145285 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.58 | 39.0 | 4.33e-01 | 85.7% | 93.9% |
| 3346946 | 3556.1.1.1 ↗ | a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 | 0.58 | 40.0 | 3.74e-01 | 71.4% | 69.9% |
| 4195627 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.58 | 36.0 | 4.03e-01 | 72.5% | 86.2% |
| 3691749 | 2487.1.1.8 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like | 0.58 | 50.0 | 3.75e-01 | 97.8% | 92.3% |
| 4117297 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.26e-01 | 78.0% | 92.9% |
| 3659855 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 37.0 | 3.95e-01 | 70.3% | 76.2% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.56 | 37.0 | 3.80e-01 | 76.9% | 70.6% |
| 3277860 | 4.1.1.368 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3097_N | 0.55 | 36.0 | 4.13e-01 | 73.6% | 93.8% |
| 1408049 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.55 | 34.0 | 3.01e-01 | 75.8% | 40.4% |
| 3197065 | 5.1.4.244 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd | 0.55 | 44.0 | 3.09e-01 | 87.9% | 99.7% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 4.24e-01 | 96.7% | 97.1% |
| 3634325 | 5.1.4.244 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd | 0.54 | 43.0 | 3.01e-01 | 86.8% | 95.9% |
| 5056802 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 48.0 | 3.31e-01 | 100.0% | 49.7% |
| 4500042 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.53 | 44.0 | 2.86e-01 | 95.6% | 85.7% |
| 3646319 | 6.1.1.25 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF569 | 0.53 | 38.0 | 3.14e-01 | 78.0% | 86.9% |
| 3284762 | 4090.1.1.0 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like | 0.52 | 36.0 | 3.12e-01 | 71.4% | 47.6% |
| 4579655 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.52 | 41.0 | 2.72e-01 | 86.8% | 80.7% |
| 3531579 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.52 | 36.0 | 3.00e-01 | 71.4% | 66.5% |
| 4995784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 37.0 | 3.95e-01 | 85.7% | 93.3% |
| 4025577 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.51 | 41.0 | 3.35e-01 | 90.1% | 57.3% |
| 4026161 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.51 | 41.0 | 3.78e-01 | 90.1% | 81.6% |
| 3484214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 40.0 | 3.37e-01 | 87.9% | 61.9% |
| 3485745 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 33.0 | 3.80e-01 | 73.6% | 100.0% |
| 3425722 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.50 | 33.0 | 3.49e-01 | 72.5% | 72.9% |
| 3989851 | 11.1.1.1339 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CFSR | 0.50 | 35.0 | 3.04e-01 | 73.6% | 55.2% |