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IMGVR_UViG_2510065051_000001-2510065051-2510274445
Arc-VirIMGVR_UViG_2510065051_000001-2510065051-2510274445
Identity
- Kingdom:
- archaea
Quality
37.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-82
D2
medium
residues 779-855
Domain cluster:
rep: IMGVR_UViG_2904958054_000001-2904958054-2904958650__D498-570
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.69 | 43.0 | 4.12e-01 | 71.4% | 55.1% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.68 | 42.0 | 3.87e-01 | 70.1% | 48.0% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.66 | 53.0 | 4.17e-01 | 88.3% | 96.3% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 45.0 | 4.93e-01 | 79.2% | 91.7% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 52.0 | 3.72e-01 | 93.5% | 86.1% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 48.0 | 3.12e-01 | 84.4% | 24.6% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.60 | 37.0 | 3.46e-01 | 71.4% | 48.0% |
| 3a21A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 41.0 | 3.95e-01 | 72.7% | 95.6% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 49.0 | 3.71e-01 | 92.2% | 89.9% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 49.0 | 3.81e-01 | 92.2% | 99.4% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 46.0 | 3.68e-01 | 85.7% | 94.5% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 50.0 | 3.38e-01 | 96.1% | 26.2% |
| 2xzsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 3.90e-01 | 74.0% | 87.9% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 40.0 | 3.52e-01 | 74.0% | 57.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.57 | 47.0 | 3.91e-01 | 93.5% | 68.6% |
| 4eqmA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 39.0 | 3.75e-01 | 71.4% | 87.6% |
| 1s9iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 3.75e-01 | 74.0% | 83.9% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.56 | 46.0 | 3.87e-01 | 92.2% | 84.6% |
| 4ao8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 46.0 | 3.34e-01 | 93.5% | 96.6% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 44.0 | 3.26e-01 | 90.9% | 93.0% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.56 | 43.0 | 2.88e-01 | 83.1% | 90.9% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 39.0 | 3.07e-01 | 74.0% | 39.4% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 38.0 | 3.22e-01 | 72.7% | 45.5% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 47.0 | 3.20e-01 | 97.4% | 92.9% |
| 3bgaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 39.0 | 2.77e-01 | 77.9% | 96.7% |
| 1k38A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 44.0 | 3.20e-01 | 93.5% | 64.9% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 41.0 | 3.57e-01 | 81.8% | 52.9% |
| 3kn6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 36.0 | 3.90e-01 | 71.4% | 83.1% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 44.0 | 2.89e-01 | 90.9% | 32.0% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 44.0 | 3.06e-01 | 93.5% | 67.9% |
| 6dq2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 45.0 | 3.15e-01 | 97.4% | 47.3% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 2.98e-01 | 96.1% | 59.1% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.52 | 36.0 | 3.21e-01 | 74.0% | 53.0% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.53e-01 | 97.4% | 68.6% |
| 2ozoA04 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 36.0 | 3.48e-01 | 74.0% | 88.9% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 2.89e-01 | 74.0% | 38.1% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4384965 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.71 | 43.0 | 4.30e-01 | 70.1% | 58.7% |
| 5061264 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.67 | 43.0 | 4.24e-01 | 70.1% | 62.5% |
| 3662275 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.66 | 41.0 | 3.29e-01 | 70.1% | 33.1% |
| 3730902 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.65 | 39.0 | 4.35e-01 | 75.3% | 76.7% |
| 3737890 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 53.0 | 3.58e-01 | 92.2% | 54.5% |
| 3619927 | 9.2.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 | 0.63 | 53.0 | 4.63e-01 | 92.2% | 88.7% |
| 3947082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 49.0 | 4.69e-01 | 90.9% | 74.4% |
| 4670897 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.61 | 53.0 | 4.38e-01 | 97.4% | 75.0% |
| 3742833 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 47.0 | 3.03e-01 | 83.1% | 22.3% |
| 3368463 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.61 | 39.0 | 3.27e-01 | 72.7% | 38.5% |
| None | — | 0.61 | 50.0 | 3.49e-01 | 92.2% | 56.6% | |
| 5044101 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.60 | 42.0 | 3.29e-01 | 75.3% | 74.4% |
| 3731706 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.59 | 48.0 | 3.06e-01 | 89.6% | 65.7% |
| 3472687 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.59 | 48.0 | 3.40e-01 | 92.2% | 74.1% |
| 4019945 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.59 | 46.0 | 2.96e-01 | 85.7% | 21.8% |
| 3369097 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.59 | 48.0 | 3.23e-01 | 92.2% | 45.3% |
| 3581710 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.59 | 48.0 | 3.50e-01 | 92.2% | 83.6% |
| 4973001 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.58 | 40.0 | 3.11e-01 | 72.7% | 75.8% |
| 3611951 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.58 | 49.0 | 3.52e-01 | 92.2% | 87.1% |
| 3701487 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 48.0 | 3.27e-01 | 93.5% | 58.4% |
| None | — | 0.58 | 48.0 | 2.86e-01 | 92.2% | 28.4% | |
| 1244069 | 243.1.1.27 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4348 | 0.57 | 37.0 | 3.30e-01 | 71.4% | 45.0% |
| 3998326 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.57 | 42.0 | 3.25e-01 | 77.9% | 49.1% |
| 4955241 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.57 | 46.0 | 3.34e-01 | 87.0% | 70.0% |
| 4954331 | 298.2.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › FwdE-like › FwdE-like | 0.57 | 46.0 | 3.70e-01 | 90.9% | 70.6% |
| 3913820 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.57 | 48.0 | 3.09e-01 | 94.8% | 79.7% |
| 3277370 | 216.1.1.14 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med1 | 0.56 | 48.0 | 3.67e-01 | 97.4% | 98.4% |
| 3626089 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.56 | 46.0 | 2.71e-01 | 90.9% | 17.3% |
| 3214007 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.55 | 38.0 | 3.30e-01 | 83.1% | 44.0% |
| 4679680 | 312.1.1.12 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DUF4931_C | 0.55 | 40.0 | 3.69e-01 | 77.9% | 99.0% |
| 4994698 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.55 | 38.0 | 2.94e-01 | 72.7% | 69.7% |
| 3316440 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 42.0 | 3.21e-01 | 80.5% | 42.2% |
| 3587744 | 9.9.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 | 0.55 | 43.0 | 3.52e-01 | 84.4% | 75.0% |
| 3856809 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 45.0 | 4.37e-01 | 94.8% | 97.8% |
| 1170111 | 243.1.1.27 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4348 | 0.55 | 35.0 | 3.13e-01 | 71.4% | 45.0% |
| 3559665 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.54 | 44.0 | 3.74e-01 | 89.6% | 79.2% |
| 3499122 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.54 | 42.0 | 3.03e-01 | 92.2% | 28.9% |
| 3483806 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.54 | 44.0 | 3.59e-01 | 92.2% | 74.0% |
| 3789793 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 44.0 | 2.59e-01 | 97.4% | 36.2% |
| 4274998 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.53 | 44.0 | 2.76e-01 | 98.7% | 32.7% |
| 3799100 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 46.0 | 2.98e-01 | 97.4% | 94.3% |
| None | — | 0.53 | 43.0 | 2.55e-01 | 90.9% | 17.6% | |
| 3239831 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 39.0 | 3.23e-01 | 79.2% | 50.0% |
| 5042955 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.52 | 42.0 | 2.48e-01 | 90.9% | 11.5% |
| 5036054 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.51 | 43.0 | 2.74e-01 | 97.4% | 83.7% |
| 3322492 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.51 | 41.0 | 2.82e-01 | 90.9% | 41.7% |
| 3597435 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.78e-01 | 94.8% | 89.9% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 39.0 | 3.46e-01 | 83.1% | 59.1% |
| 3556145 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.50 | 43.0 | 3.22e-01 | 100.0% | 56.7% |