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IMGVR_UViG_2510065051_000001-2510065051-2510274507
Arc-VirIMGVR_UViG_2510065051_000001-2510065051-2510274507
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-167_275-314
Domain cluster:
rep: OP172637.1__WAX05334.1__AC844P3_00005__00005__D2-164_267-294
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ostA00 | 3.30.310.220 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Fungal kinase associated-1 domain | 0.73 | 39.0 | 5.06e-01 | 77.5% | 89.9% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.70 | 36.0 | 4.31e-01 | 76.5% | 70.9% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.61 | 23.0 | 3.16e-01 | 80.9% | 63.8% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 40.0 | 4.79e-01 | 75.5% | 96.5% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 28.0 | 3.78e-01 | 100.0% | 89.0% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 23.0 | 3.07e-01 | 89.2% | 67.6% |
| 2flhB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 40.0 | 4.56e-01 | 77.0% | 99.3% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.55 | 40.0 | 3.98e-01 | 76.5% | 71.0% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 36.0 | 4.24e-01 | 77.0% | 95.1% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.54 | 39.0 | 4.10e-01 | 76.5% | 80.4% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 35.0 | 4.17e-01 | 77.0% | 95.7% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.54 | 30.0 | 3.18e-01 | 83.3% | 57.7% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 38.0 | 4.15e-01 | 77.0% | 85.1% |
| 4g3wA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 32.0 | 3.83e-01 | 100.0% | 86.9% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 39.0 | 4.39e-01 | 76.5% | 95.1% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 38.0 | 4.14e-01 | 77.9% | 91.1% |
| 2le1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 37.0 | 4.28e-01 | 78.9% | 100.0% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.83e-01 | 76.5% | 79.0% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 30.0 | 3.30e-01 | 77.9% | 68.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5073891 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.71 | 36.0 | 5.08e-01 | 74.0% | 100.0% |
| 3275260 | 331.4.1.6 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DEPDC5_CTD | 0.68 | 32.0 | 4.59e-01 | 100.0% | 94.7% |
| 3677415 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.66 | 34.0 | 4.29e-01 | 76.5% | 81.7% |
| 2067736 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 31.0 | 4.42e-01 | 81.9% | 98.9% |
| 3494434 | 3435.1.1.8 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DEPDC5_CTD | 0.63 | 36.0 | 4.33e-01 | 100.0% | 83.0% |
| 4632603 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.62 | 29.0 | 3.61e-01 | 88.7% | 68.5% |
| 4965849 | 3435.1.1.9 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › DUF4747 | 0.62 | 59.0 | 5.45e-01 | 100.0% | 98.8% |
| 4926998 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 22.0 | 2.87e-01 | 76.5% | 53.3% |
| 1715835 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.61 | 40.0 | 4.79e-01 | 75.5% | 96.5% |
| 3784456 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.61 | 41.0 | 4.89e-01 | 78.9% | 100.0% |
| 3591827 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.60 | 39.0 | 4.67e-01 | 79.4% | 97.0% |
| 2130817 | 881.1.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 | 0.59 | 39.0 | 4.15e-01 | 100.0% | 73.1% |
| 3962319 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 35.0 | 4.00e-01 | 98.5% | 77.3% |
| 3397338 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 39.0 | 4.66e-01 | 77.9% | 100.0% |
| 3997170 | 9.1.1.48 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_10 | 0.57 | 35.0 | 3.68e-01 | 76.5% | 65.4% |
| 370870 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 36.0 | 4.37e-01 | 77.0% | 99.3% |
| 3749143 | 243.3.1.20 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 | 0.55 | 30.0 | 3.71e-01 | 77.0% | 84.8% |
| 3727125 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 28.0 | 3.51e-01 | 81.4% | 83.5% |
| 3284899 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 25.0 | 3.56e-01 | 82.4% | 100.0% |
| 4463771 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.53 | 27.0 | 3.70e-01 | 79.9% | 95.2% |
| 4023252 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 32.0 | 3.92e-01 | 100.0% | 96.2% |
| 3246034 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.51 | 30.0 | 3.48e-01 | 89.2% | 78.0% |
| 4929661 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.50 | 37.0 | 4.18e-01 | 76.5% | 100.0% |
D2
high
residues 171-267
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zyrA02 | 2.60.40.2190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 35.0 | 3.62e-01 | 100.0% | 68.1% |
| 1p3cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 35.0 | 3.49e-01 | 100.0% | 64.8% |
| 1t4aA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.51 | 39.0 | 4.19e-01 | 84.5% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989548 | 11.1.1.370 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › AGS_C | 0.56 | 38.0 | 4.14e-01 | 100.0% | 86.3% |
| 3695142 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.52 | 45.0 | 2.88e-01 | 94.8% | 76.9% |
| 4220910 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 38.0 | 3.49e-01 | 80.4% | 88.1% |
| 4995764 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 44.0 | 3.40e-01 | 100.0% | 90.6% |
| 5042975 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 42.0 | 3.33e-01 | 93.8% | 44.6% |