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IMGVR_UViG_2513237066_000001-2513237066-2513474451
Arc-VirIMGVR_UViG_2513237066_000001-2513237066-2513474451
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-53
Domain cluster:
rep: MW273920.1__QPZ53344.1__HTVC024P_gp24__00024__D3-53
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 41.0 | 2.93e-01 | 76.5% | 40.0% |
| 4g1gA02 | 2.70.20.60 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain | 0.54 | 40.0 | 2.93e-01 | 84.3% | 85.2% |
| 1lwdA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 37.0 | 2.29e-01 | 80.4% | 50.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3687547 | 11.1.1.150 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Velvet | 0.59 | 39.0 | 3.49e-01 | 70.6% | 45.3% |
| 3279377 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 39.0 | 3.15e-01 | 74.5% | 55.2% |
| 3237718 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.52 | 42.0 | 3.11e-01 | 90.2% | 68.6% |
| 4630281 | 327.13.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C | 0.52 | 39.0 | 2.73e-01 | 84.3% | 48.6% |
| 4951978 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 41.0 | 2.91e-01 | 90.2% | 77.4% |
| 3312219 | 706.2.1.5 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › Tim44 | 0.51 | 38.0 | 3.57e-01 | 86.3% | 75.7% |
| 5011765 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 38.0 | 2.84e-01 | 82.4% | 43.0% |