←Back to structures
IMGVR_UViG_2513237066_000001-2513237066-2513474455
Arc-VirIMGVR_UViG_2513237066_000001-2513237066-2513474455
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
rep: KC465898.1__AGE60315.1__X__00045__D3-45
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5d1kB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.73 | 54.0 | 4.92e-01 | 92.7% | 58.4% |
| 1vq8U00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.72 | 51.0 | 5.18e-01 | 78.2% | 77.4% |
| 2wtvA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.69 | 41.0 | 2.88e-01 | 100.0% | 19.4% |
| 2jrjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 47.0 | 4.79e-01 | 83.6% | 75.0% |
| 4azsA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 38.0 | 2.82e-01 | 96.4% | 24.6% |
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 47.0 | 4.84e-01 | 83.6% | 98.1% |
| 4d4iA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.60 | 42.0 | 2.48e-01 | 94.5% | 9.8% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 43.0 | 3.82e-01 | 92.7% | 93.0% |
| 7knlA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 37.0 | 3.05e-01 | 76.4% | 91.2% |
| 2oxaA01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.52 | 47.0 | 2.78e-01 | 100.0% | 76.7% |
| 2kinA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 44.0 | 2.94e-01 | 100.0% | 48.7% |
| 4c0rA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 37.0 | 3.02e-01 | 83.6% | 87.7% |
| 7wrgB01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.50 | 44.0 | 2.75e-01 | 98.2% | 41.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3622376 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.82 | 55.0 | 5.41e-01 | 80.0% | 65.0% |
| 3361724 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.77 | 55.0 | 4.57e-01 | 78.2% | 45.6% |
| 5052621 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.76 | 52.0 | 5.22e-01 | 80.0% | 70.9% |
| 4670027 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.75 | 54.0 | 4.99e-01 | 78.2% | 60.0% |
| 3845445 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.75 | 55.0 | 5.99e-01 | 81.8% | 95.6% |
| 5040191 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.74 | 53.0 | 5.05e-01 | 78.2% | 65.6% |
| 3990940 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.73 | 59.0 | 5.34e-01 | 100.0% | 66.7% |
| 5010149 | 377.1.1.131 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TRASH_HVO_1752_C | 0.72 | 50.0 | 5.63e-01 | 78.2% | 100.0% |
| 3540263 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.72 | 55.0 | 5.90e-01 | 85.5% | 100.0% |
| 3626567 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 58.0 | 5.28e-01 | 100.0% | 66.7% |
| 3532171 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.71 | 51.0 | 5.47e-01 | 80.0% | 93.3% |
| 3907975 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.71 | 53.0 | 5.68e-01 | 83.6% | 97.8% |
| 3790267 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.70 | 56.0 | 5.10e-01 | 100.0% | 66.7% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 45.0 | 5.03e-01 | 72.7% | 92.5% |
| 5049855 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 53.0 | 5.15e-01 | 85.5% | 80.0% |
| 3494950 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 52.0 | 4.68e-01 | 100.0% | 60.0% |
| 3747111 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 50.0 | 4.70e-01 | 83.6% | 70.8% |
| 3936911 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 46.0 | 4.82e-01 | 80.0% | 100.0% |
| 3818617 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.63 | 54.0 | 5.41e-01 | 96.4% | 100.0% |
| 3323549 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.62 | 46.0 | 4.66e-01 | 80.0% | 80.0% |
| 3214194 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.58 | 47.0 | 4.57e-01 | 98.2% | 96.9% |
| 5060491 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.58 | 51.0 | 3.89e-01 | 96.4% | 45.8% |
| 3813302 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.57 | 48.0 | 4.47e-01 | 100.0% | 82.7% |
| 3935843 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.57 | 41.0 | 3.79e-01 | 80.0% | 72.0% |
| 3849360 | 376.1.3.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RIM2a_ZnF | 0.56 | 45.0 | 4.24e-01 | 100.0% | 89.3% |
| 1545617 | 316.1.1.33 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › APMV_polyA_pol_cat_2nd | 0.55 | 46.0 | 2.91e-01 | 92.7% | 62.5% |
| 3936039 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 46.0 | 3.09e-01 | 100.0% | 49.3% |
| 4942722 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.53 | 47.0 | 4.15e-01 | 98.2% | 86.3% |
| 5073214 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.52 | 47.0 | 4.37e-01 | 100.0% | 100.0% |
| 4932487 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.52 | 47.0 | 4.35e-01 | 100.0% | 98.6% |