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IMGVR_UViG_2524614823_000001-2524614823-2525943552
Arc-VirIMGVR_UViG_2524614823_000001-2524614823-2525943552
Identity
- Kingdom:
- archaea
Quality
55.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-157
Domain cluster:
rep: IMGVR_UViG_3300026962_000013-3300026962-Ga0207813_100003394__D32-139
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.59 | 37.0 | 3.92e-01 | 75.2% | 68.3% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 42.0 | 3.99e-01 | 83.5% | 81.3% |
| 1k1yB02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 41.0 | 3.33e-01 | 85.0% | 95.6% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 28.0 | 2.97e-01 | 78.2% | 55.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3434245 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.58 | 44.0 | 4.10e-01 | 79.7% | 98.2% |
| 3927397 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.57 | 41.0 | 3.29e-01 | 79.7% | 39.2% |
| 3249225 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.56 | 41.0 | 3.83e-01 | 87.2% | 61.9% |
| 3994341 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.54 | 41.0 | 3.37e-01 | 83.5% | 44.8% |
| 3654114 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.53 | 39.0 | 3.38e-01 | 75.2% | 74.8% |
| 3173251 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.52 | 41.0 | 3.81e-01 | 82.7% | 80.0% |
| 3181915 | 11.1.1.926 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7136 | 0.52 | 42.0 | 3.57e-01 | 88.7% | 91.7% |
| 3806458 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.51 | 32.0 | 3.20e-01 | 75.9% | 57.9% |
| 4959786 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.64e-01 | 81.2% | 81.2% |
| 3540628 | 11.1.1.917 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30052 | 0.50 | 32.0 | 3.25e-01 | 77.4% | 62.2% |
D2
high
residues 510-601
D3
medium
residues 179-277
Domain cluster:
rep: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_10056737__D8-106
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.79 | 73.0 | 6.09e-01 | 100.0% | 75.5% |
| 1r3fA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.73 | 41.0 | 4.96e-01 | 100.0% | 84.6% |
| 1v47A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.64 | 58.0 | 5.27e-01 | 100.0% | 92.5% |
| 1jhdA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.62 | 55.0 | 4.45e-01 | 100.0% | 67.4% |
| 4rcmB00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.61 | 51.0 | 4.34e-01 | 100.0% | 56.0% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 52.0 | 4.59e-01 | 100.0% | 83.1% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 41.0 | 2.98e-01 | 88.9% | 84.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 79.0 | 7.36e-01 | 100.0% | 86.7% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.84 | 79.0 | 7.31e-01 | 100.0% | 82.5% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 78.0 | 7.47e-01 | 99.0% | 93.6% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.83 | 78.0 | 7.50e-01 | 100.0% | 91.8% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.83 | 77.0 | 7.32e-01 | 100.0% | 87.8% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 77.0 | 7.55e-01 | 100.0% | 96.2% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.82 | 76.0 | 6.98e-01 | 100.0% | 81.6% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 75.0 | 7.27e-01 | 100.0% | 91.8% |
| 5023996 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 75.0 | 7.15e-01 | 100.0% | 94.7% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.80 | 72.0 | 6.92e-01 | 100.0% | 86.4% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 73.0 | 6.98e-01 | 100.0% | 87.0% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 73.0 | 6.85e-01 | 100.0% | 90.0% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 73.0 | 6.47e-01 | 100.0% | 78.4% |
| 4576540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 41.0 | 5.12e-01 | 100.0% | 85.0% |
| 4155252 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.77 | 71.0 | 6.96e-01 | 100.0% | 94.3% |
| 4398407 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.77 | 43.0 | 5.21e-01 | 100.0% | 84.6% |
| 5078127 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.75 | 60.0 | 6.37e-01 | 83.8% | 98.8% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.75 | 68.0 | 6.75e-01 | 100.0% | 94.3% |
| 5078686 | 1.1.9.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › Methyltranf_PUA | 0.73 | 39.0 | 4.76e-01 | 100.0% | 80.0% |
| 3508132 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.73 | 41.0 | 4.95e-01 | 100.0% | 84.6% |
| 4954659 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.71 | 65.0 | 5.41e-01 | 100.0% | 72.7% |
| 4967879 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 56.0 | 5.74e-01 | 100.0% | 94.7% |
| 3960558 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 51.0 | 4.77e-01 | 97.0% | 88.0% |
| 3588396 | 2.12.1.1 ↗ | beta barrels › OB-fold › BC4932-like › BC4932-like › DUF1093 | 0.58 | 28.0 | 2.80e-01 | 74.7% | 41.9% |
| 3283851 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.57 | 50.0 | 4.59e-01 | 100.0% | 86.2% |
| 3284911 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.55 | 47.0 | 4.21e-01 | 100.0% | 74.7% |
| 5048653 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 48.0 | 4.13e-01 | 100.0% | 79.4% |
| 3570201 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.53 | 42.0 | 3.49e-01 | 86.9% | 90.0% |
| 4989505 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.51 | 34.0 | 2.72e-01 | 88.9% | 29.8% |
D4
medium
residues 360-380_413-441