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IMGVR_UViG_2528311097_000001-2528311097-2528599899
Arc-VirIMGVR_UViG_2528311097_000001-2528311097-2528599899
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-141
Domain cluster:
rep: MH238466.1__AWY03247.1__X__00024__D19-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05069.19 best | Phage_tail_S | 24.5 | 3.00e-05 | 90.4% | 65.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.66 | 28.0 | 3.97e-01 | 74.3% | 87.9% |
| 3gwmA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.57 | 34.0 | 3.46e-01 | 83.8% | 58.1% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.56 | 43.0 | 4.33e-01 | 90.4% | 79.4% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.54 | 29.0 | 3.17e-01 | 88.2% | 60.9% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 29.0 | 3.11e-01 | 83.1% | 57.7% |
| 2bddA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 29.0 | 3.03e-01 | 100.0% | 57.5% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.52 | 30.0 | 3.16e-01 | 85.3% | 60.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3786399 | 622.1.1.18 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › ICE2 | 0.69 | 35.0 | 3.64e-01 | 94.9% | 51.5% |
| 5047097 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.63 | 37.0 | 3.47e-01 | 82.4% | 47.3% |
| 5077285 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.55 | 43.0 | 3.15e-01 | 84.6% | 57.8% |
| 3222449 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 37.0 | 2.84e-01 | 100.0% | 33.8% |
| 3520199 | 389.1.1.1 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF | 0.51 | 18.0 | 2.88e-01 | 70.6% | 95.0% |