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IMGVR_UViG_2529292698_000001-2529292698-2529621616
Arc-VirIMGVR_UViG_2529292698_000001-2529292698-2529621616
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59_80-96
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ieyA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.77 | 65.0 | 5.88e-01 | 90.8% | 94.0% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.76 | 68.0 | 5.58e-01 | 97.4% | 65.4% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.76 | 67.0 | 6.08e-01 | 96.1% | 94.0% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.74 | 62.0 | 5.72e-01 | 90.8% | 93.7% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.73 | 66.0 | 4.84e-01 | 100.0% | 58.8% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.73 | 61.0 | 4.80e-01 | 90.8% | 98.7% |
| 1y79101 | 1.10.1370.40 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › | 0.69 | 57.0 | 3.61e-01 | 92.1% | 29.1% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.69 | 57.0 | 4.57e-01 | 92.1% | 80.1% |
| 2e52B01 | 3.40.91.70 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII | 0.67 | 59.0 | 4.22e-01 | 98.7% | 61.2% |
| 4qbnA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 56.0 | 5.30e-01 | 93.4% | 98.9% |
| 4ka7A01 | 1.10.1370.40 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › | 0.65 | 56.0 | 3.49e-01 | 94.7% | 30.8% |
| 5c3vA01 | 3.30.800.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta | 0.64 | 42.0 | 3.22e-01 | 90.8% | 30.5% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.62 | 54.0 | 4.03e-01 | 100.0% | 54.9% |
| 2g3wA00 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.61 | 53.0 | 4.10e-01 | 98.7% | 82.7% |
| 2ot9A01 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.61 | 53.0 | 4.07e-01 | 97.4% | 82.4% |
| 1d02B00 | 3.40.580.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A | 0.57 | 47.0 | 3.53e-01 | 92.1% | 87.0% |
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 38.0 | 3.97e-01 | 89.5% | 76.1% |
| 6u26A01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.57 | 39.0 | 3.72e-01 | 71.1% | 64.8% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 41.0 | 3.48e-01 | 80.3% | 75.6% |
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.55 | 45.0 | 4.19e-01 | 92.1% | 93.9% |
| 2js3A01 | 1.10.287.780 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ITPase-like domains | 0.55 | 30.0 | 3.09e-01 | 73.7% | 51.3% |
| 4oi3A00 | 3.30.70.3090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer | 0.55 | 40.0 | 4.01e-01 | 98.7% | 75.3% |
| 1yrxC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 41.0 | 3.72e-01 | 80.3% | 66.3% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.53 | 43.0 | 4.03e-01 | 89.5% | 85.1% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.53 | 37.0 | 3.69e-01 | 89.5% | 69.5% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 41.0 | 3.48e-01 | 89.5% | 58.3% |
| 6lpwB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 44.0 | 3.38e-01 | 100.0% | 74.3% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 27.0 | 3.05e-01 | 82.9% | 67.8% |
| 3opyB01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 40.0 | 3.39e-01 | 89.5% | 77.8% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4015105 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.80 | 70.0 | 5.65e-01 | 93.4% | 90.4% |
| 5000875 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.79 | 66.0 | 6.18e-01 | 88.2% | 97.8% |
| 4948773 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.78 | 69.0 | 5.27e-01 | 96.1% | 55.6% |
| 3005282 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.78 | 68.0 | 5.69e-01 | 94.7% | 90.4% |
| 3785807 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.78 | 67.0 | 5.36e-01 | 92.1% | 84.9% |
| 3954245 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.78 | 67.0 | 5.72e-01 | 93.4% | 97.5% |
| 5048373 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.77 | 68.0 | 6.07e-01 | 96.1% | 87.6% |
| 3253755 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.77 | 67.0 | 5.84e-01 | 93.4% | 96.4% |
| 4313486 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.77 | 67.0 | 5.33e-01 | 94.7% | 100.0% |
| 1837447 | 2008.1.1.56 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_5 | 0.76 | 68.0 | 5.53e-01 | 97.4% | 65.2% |
| 4937663 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.76 | 67.0 | 5.96e-01 | 94.7% | 94.2% |
| 5016968 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.76 | 67.0 | 5.52e-01 | 97.4% | 77.8% |
| 4307642 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.76 | 68.0 | 6.03e-01 | 97.4% | 91.4% |
| 3213212 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.76 | 67.0 | 5.96e-01 | 96.1% | 93.3% |
| 4947849 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.76 | 67.0 | 6.18e-01 | 96.1% | 96.8% |
| 4934505 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.75 | 67.0 | 6.24e-01 | 97.4% | 96.8% |
| 4311371 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.75 | 66.0 | 5.68e-01 | 97.4% | 95.0% |
| 5026220 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 60.0 | 4.53e-01 | 86.8% | 66.3% |
| 5026622 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.74 | 61.0 | 5.61e-01 | 88.2% | 87.4% |
| 4029435 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.74 | 66.0 | 5.94e-01 | 98.7% | 91.4% |
| 4958464 | 2008.1.1.205 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26915 | 0.69 | 59.0 | 5.11e-01 | 96.1% | 89.2% |
| 4971490 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.69 | 55.0 | 4.88e-01 | 86.8% | 94.5% |
| 4940209 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 60.0 | 5.55e-01 | 96.1% | 91.6% |
| 5080532 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.68 | 56.0 | 4.97e-01 | 89.5% | 94.4% |
| 4609469 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 54.0 | 4.75e-01 | 85.5% | 96.4% |
| 5027289 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 58.0 | 4.36e-01 | 96.1% | 74.6% |
| 5067597 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.67 | 56.0 | 4.94e-01 | 90.8% | 95.5% |
| 4667837 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.67 | 57.0 | 4.44e-01 | 92.1% | 97.5% |
| 5037144 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 57.0 | 4.84e-01 | 93.4% | 89.5% |
| 5061506 | 2008.1.1.108 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 | 0.66 | 56.0 | 4.88e-01 | 93.4% | 92.2% |
| 5009639 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 56.0 | 3.60e-01 | 93.4% | 33.5% |
| 5015088 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.66 | 55.0 | 4.16e-01 | 94.7% | 99.5% |
| 5030624 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.66 | 47.0 | 4.26e-01 | 76.3% | 97.1% |
| 4935861 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 56.0 | 4.77e-01 | 93.4% | 88.3% |
| 5073123 | 2008.5.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C | 0.65 | 56.0 | 4.65e-01 | 97.4% | 82.9% |
| 5031046 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 53.0 | 4.79e-01 | 88.2% | 100.0% |
| 4944368 | 2008.1.1.11 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA | 0.65 | 55.0 | 4.41e-01 | 96.1% | 98.1% |
| 4033230 | 2008.1.1.155 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › CoiA_nuc | 0.64 | 56.0 | 4.57e-01 | 98.7% | 97.9% |
| 4947992 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 54.0 | 4.79e-01 | 93.4% | 99.1% |
| 4352326 | 2008.1.1.81 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2726 | 0.64 | 55.0 | 4.73e-01 | 96.1% | 95.8% |
| 4932253 | 2008.1.1.100 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N_2 | 0.64 | 51.0 | 4.16e-01 | 88.2% | 69.7% |
| 5046617 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 53.0 | 4.05e-01 | 93.4% | 90.2% |
| 3972599 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 53.0 | 4.23e-01 | 92.1% | 89.0% |
| 4955419 | 2008.1.1.108 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 | 0.63 | 52.0 | 4.69e-01 | 92.1% | 87.6% |
| 4952288 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.63 | 52.0 | 4.76e-01 | 92.1% | 100.0% |
| 3274159 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 53.0 | 4.70e-01 | 97.4% | 87.8% |
| 4995284 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.62 | 49.0 | 4.47e-01 | 88.2% | 98.1% |
| 4958442 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.61 | 51.0 | 3.99e-01 | 96.1% | 94.4% |
| 3203393 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.61 | 41.0 | 4.41e-01 | 84.2% | 81.5% |
| 4171461 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 51.0 | 3.96e-01 | 96.1% | 93.0% |
| 4053762 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 51.0 | 4.43e-01 | 93.4% | 85.8% |
| 4271425 | 2008.1.1.81 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2726 | 0.61 | 50.0 | 4.04e-01 | 94.7% | 71.2% |
| 166841 | 2008.1.1.25 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YaeQ | 0.61 | 53.0 | 4.06e-01 | 98.7% | 81.4% |
| 3697816 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.61 | 51.0 | 3.96e-01 | 97.4% | 82.6% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.60 | 51.0 | 3.54e-01 | 97.4% | 51.2% |
| 4964370 | 2008.1.1.230 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7527 | 0.60 | 51.0 | 3.72e-01 | 98.7% | 99.6% |
| 5027476 | 2008.1.1.17 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF559 | 0.59 | 48.0 | 4.49e-01 | 92.1% | 97.0% |
| 3808505 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.59 | 52.0 | 5.04e-01 | 98.7% | 100.0% |
| 3606615 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.58 | 49.0 | 4.65e-01 | 93.4% | 93.3% |
| 1179385 | 316.1.1.7 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Pox_polyA_pol | 0.58 | 40.0 | 3.10e-01 | 72.4% | 39.3% |
| 4965617 | 2008.1.1.219 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF790 | 0.57 | 48.0 | 4.11e-01 | 96.1% | 88.5% |
| 3964887 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 47.0 | 3.93e-01 | 90.8% | 99.3% |
| 4928680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 50.0 | 3.75e-01 | 100.0% | 53.2% |
| 3594326 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.56 | 46.0 | 4.59e-01 | 93.4% | 97.5% |
| 5039328 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 32.0 | 3.40e-01 | 81.6% | 62.9% |
| 5061809 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 31.0 | 2.97e-01 | 98.7% | 46.7% |
| 3503973 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 40.0 | 3.36e-01 | 80.3% | 76.2% |
| 1141888 | 331.10.2.2 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › SpmSyn_N | 0.53 | 43.0 | 4.01e-01 | 92.1% | 83.3% |
| 3593422 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.52 | 43.0 | 2.82e-01 | 93.4% | 26.7% |
| 3342495 | 386.1.1.117 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 | 0.52 | 37.0 | 3.64e-01 | 97.4% | 68.2% |
| 5079456 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.52 | 37.0 | 2.89e-01 | 77.6% | 32.8% |
| 3664116 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.51 | 44.0 | 2.86e-01 | 100.0% | 81.9% |
| 3641242 | 70.3.1.11 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET, zf-MYND | 0.51 | 42.0 | 2.72e-01 | 92.1% | 75.7% |
| 3949624 | 323.1.1.8 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_cat | 0.50 | 41.0 | 3.14e-01 | 94.7% | 67.0% |
| 157490 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.50 | 42.0 | 2.44e-01 | 93.4% | 56.6% |
D2
medium
residues 60-79_97-128
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y10B02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.63 | 54.0 | 3.76e-01 | 100.0% | 48.6% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.63 | 52.0 | 3.64e-01 | 100.0% | 51.0% |
| 3mr7A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.61 | 50.0 | 3.63e-01 | 100.0% | 45.7% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.59 | 44.0 | 4.17e-01 | 94.2% | 65.7% |
| 4qclA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 3.96e-01 | 98.1% | 67.6% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 3.93e-01 | 96.2% | 60.2% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 44.0 | 3.71e-01 | 96.2% | 100.0% |
| 2ldyA01 | 3.30.70.1820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › L1 transposable element, RRM domain | 0.54 | 41.0 | 3.57e-01 | 94.2% | 71.4% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 46.0 | 3.78e-01 | 100.0% | 54.5% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 44.0 | 3.75e-01 | 98.1% | 66.0% |
| 4ga6A04 | 3.90.1170.30 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Pyrimidine nucleoside phosphorylase-like, C-terminal domain | 0.52 | 36.0 | 3.20e-01 | 100.0% | 48.1% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 43.0 | 3.67e-01 | 100.0% | 69.1% |
| 3ktwB00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.52 | 41.0 | 3.51e-01 | 94.2% | 71.0% |
| 4q5tA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 42.0 | 3.21e-01 | 100.0% | 52.4% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.51 | 40.0 | 3.21e-01 | 98.1% | 64.8% |
| 2ob0C01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 3.04e-01 | 100.0% | 57.4% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.50 | 40.0 | 3.60e-01 | 100.0% | 98.8% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.62 | 51.0 | 3.58e-01 | 100.0% | 51.0% | |
| 5054484 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.62 | 49.0 | 4.57e-01 | 92.3% | 97.1% |
| 139671 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.61 | 50.0 | 3.63e-01 | 100.0% | 45.7% |
| 5064977 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 47.0 | 4.18e-01 | 90.4% | 80.0% |
| 4931230 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.59 | 45.0 | 3.91e-01 | 94.2% | 51.1% |
| 3784198 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.59 | 50.0 | 4.05e-01 | 98.1% | 71.4% |
| 3553551 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.59 | 48.0 | 3.99e-01 | 92.3% | 76.8% |
| 1878708 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.57 | 49.0 | 4.06e-01 | 98.1% | 76.5% |
| 3762458 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 49.0 | 4.04e-01 | 98.1% | 75.0% |
| 3484070 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.56 | 47.0 | 3.82e-01 | 94.2% | 70.0% |
| 3613686 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.56 | 46.0 | 2.87e-01 | 100.0% | 71.7% |
| 3220991 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 3.54e-01 | 100.0% | 88.9% |
| 5031636 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 45.0 | 3.61e-01 | 100.0% | 53.3% |
| 3225950 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.55 | 42.0 | 3.44e-01 | 94.2% | 44.2% |
| 5072186 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.55 | 44.0 | 3.67e-01 | 98.1% | 50.5% |
| 3652417 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.55 | 44.0 | 3.38e-01 | 100.0% | 58.6% |
| 5030783 | 242.1.1.3 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › Hom_end | 0.54 | 44.0 | 3.81e-01 | 100.0% | 58.9% |
| 4629783 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 45.0 | 3.57e-01 | 100.0% | 50.8% |
| 4950064 | 327.16.1.22 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF27275 | 0.53 | 41.0 | 3.88e-01 | 94.2% | 75.7% |
| 5005283 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.53 | 44.0 | 3.93e-01 | 92.3% | 66.7% |
| 5032338 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 45.0 | 3.54e-01 | 100.0% | 49.2% |
| 4938493 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.41e-01 | 90.4% | 62.9% |
| 3510141 | 2003.1.5.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DOT1 | 0.52 | 42.0 | 2.90e-01 | 100.0% | 32.9% |
| 4971395 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.52 | 40.0 | 3.52e-01 | 98.1% | 63.2% |
| 4029891 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.51 | 39.0 | 3.59e-01 | 98.1% | 100.0% |
| 3522520 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.51 | 40.0 | 3.66e-01 | 96.2% | 68.8% |
| 4996937 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.51 | 39.0 | 3.46e-01 | 94.2% | 58.9% |
| 4141791 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.51 | 42.0 | 3.81e-01 | 96.2% | 69.3% |
| 5046388 | 3110.1.1.15 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › PF30772 | 0.51 | 41.0 | 3.34e-01 | 100.0% | 80.0% |
| 4941329 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.51 | 43.0 | 3.57e-01 | 100.0% | 61.0% |
| 4989036 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.50 | 38.0 | 3.40e-01 | 94.2% | 58.9% |
| 4387283 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.50 | 38.0 | 3.38e-01 | 94.2% | 58.9% |