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IMGVR_UViG_2529292698_000002-2529292698-2529621243

Arc-Vir

IMGVR_UViG_2529292698_000002-2529292698-2529621243

Identity

Kingdom:
archaea

Quality

93.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-86
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.66 55.0 4.59e-01 91.9% 80.9%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.65 54.0 4.39e-01 91.9% 88.6%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 4.55e-01 100.0% 73.3%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 53.0 4.49e-01 95.3% 96.8%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 37.0 3.70e-01 91.9% 55.6%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 53.0 4.32e-01 94.2% 74.0%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.62 41.0 3.28e-01 98.8% 33.3%
4nyqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 52.0 4.33e-01 95.3% 69.9%
4an6B00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 51.0 4.21e-01 100.0% 95.9%
2iwtB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 52.0 4.15e-01 100.0% 95.6%
4ffgA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 43.0 2.91e-01 76.7% 34.0%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.49e-01 91.9% 85.5%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 4.15e-01 96.5% 94.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 34.0 4.12e-01 97.7% 92.9%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.55 46.0 3.81e-01 97.7% 97.7%
7emfR01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.55 44.0 3.52e-01 90.7% 43.4%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 4.13e-01 97.7% 92.4%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 43.0 3.70e-01 90.7% 74.0%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.53 45.0 3.15e-01 96.5% 98.1%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 4.18e-01 91.9% 86.0%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.53 43.0 4.20e-01 90.7% 81.1%
4bbwA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 42.0 2.89e-01 90.7% 79.1%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 38.0 4.24e-01 96.5% 98.5%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.52 45.0 3.68e-01 100.0% 98.9%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.94e-01 91.9% 75.5%
2h6oA01 2.60.40.2800 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 45.0 3.82e-01 100.0% 69.1%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.51 42.0 4.17e-01 90.7% 92.4%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 3.94e-01 100.0% 94.3%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.51 45.0 2.86e-01 98.8% 32.8%
2uwaA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 3.11e-01 97.7% 54.4%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.78e-01 89.5% 71.6%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967347 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 48.0 5.10e-01 100.0% 84.0%
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 40.0 4.85e-01 95.3% 92.7%
3989574 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 46.0 4.66e-01 100.0% 71.8%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 36.0 4.39e-01 93.0% 87.3%
3975862 220.1.1.104 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.64 45.0 4.69e-01 89.5% 80.0%
4107506 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 33.0 3.78e-01 81.4% 67.7%
3737927 220.1.1.294 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.63 52.0 4.84e-01 90.7% 71.8%
3973076 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.62 42.0 3.07e-01 98.8% 25.7%
3165403 4958.1.1.0 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit 0.62 33.0 3.76e-01 80.2% 67.7%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.62 40.0 4.61e-01 96.5% 93.3%
1778160 109.1.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.61 40.0 2.95e-01 98.8% 24.2%
4127839 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.61 32.0 3.44e-01 80.2% 58.7%
4183857 325.1.7.30 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 0.61 32.0 3.44e-01 81.4% 58.7%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.61 34.0 4.15e-01 90.7% 87.3%
3877687 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 50.0 4.39e-01 91.9% 74.6%
4068978 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 33.0 3.49e-01 80.2% 60.0%
3531867 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.60 49.0 3.86e-01 90.7% 42.2%
5075805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 35.0 4.12e-01 96.5% 89.1%
4159666 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 34.0 3.16e-01 79.1% 44.0%
4564828 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.60 49.0 4.02e-01 90.7% 49.0%
3237220 220.1.1.84 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.60 48.0 4.44e-01 90.7% 81.7%
4031151 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.59 41.0 4.34e-01 90.7% 82.7%
3620222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 48.0 4.35e-01 90.7% 77.5%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 35.0 3.61e-01 91.9% 61.2%
4041376 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 40.0 4.19e-01 100.0% 77.5%
3279614 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.58 40.0 3.36e-01 100.0% 40.6%
5052551 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.57 38.0 3.36e-01 94.2% 46.4%
3258675 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.57 46.0 3.95e-01 90.7% 54.3%
3536447 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.56 45.0 3.82e-01 90.7% 51.7%
3189510 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 37.0 4.33e-01 96.5% 100.0%
3526900 269.1.1.0 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like 0.55 47.0 3.11e-01 100.0% 41.5%
157526 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 36.0 4.15e-01 90.7% 95.2%
3991896 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 43.0 4.15e-01 98.8% 75.8%
4426276 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 39.0 4.21e-01 100.0% 98.6%
3631298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 37.0 3.92e-01 91.9% 81.3%
853 9.1.1.23 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.52 43.0 3.82e-01 95.3% 89.4%
3821398 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.50 41.0 2.87e-01 91.9% 50.8%