←Back to structures
IMGVR_UViG_2529292698_000002-2529292698-2529621259
Arc-VirIMGVR_UViG_2529292698_000002-2529292698-2529621259
Identity
- Kingdom:
- archaea
Quality
91.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-41
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qm3A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 45.0 | 3.45e-01 | 100.0% | 30.1% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.69 | 54.0 | 4.97e-01 | 94.9% | 78.9% |
| 3nxaB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.62 | 50.0 | 3.96e-01 | 100.0% | 76.3% |
| 4e3wA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.62 | 49.0 | 2.96e-01 | 100.0% | 28.9% |
| 2cw7A04 | 1.10.8.1330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Intein homing endonuclease, domain III | 0.56 | 40.0 | 3.83e-01 | 84.6% | 73.6% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 41.0 | 3.69e-01 | 100.0% | 55.0% |
| 3ndzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 42.0 | 2.49e-01 | 100.0% | 92.8% |
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.50 | 38.0 | 3.81e-01 | 87.2% | 90.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3445061 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 55.0 | 4.76e-01 | 97.4% | 58.5% |
| 3222216 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.65 | 53.0 | 4.53e-01 | 97.4% | 77.1% |
| 4027053 | 330.7.1.4 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › CPW_WPC | 0.51 | 38.0 | 3.79e-01 | 92.3% | 100.0% |