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IMGVR_UViG_2529292698_000002-2529292698-2529621301
Arc-VirIMGVR_UViG_2529292698_000002-2529292698-2529621301
Identity
- Kingdom:
- archaea
Quality
88.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-115
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.72 | 43.0 | 5.31e-01 | 76.3% | 100.0% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.61 | 40.0 | 3.74e-01 | 80.4% | 52.0% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.61 | 52.0 | 4.64e-01 | 91.8% | 86.5% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.60 | 38.0 | 4.40e-01 | 78.4% | 92.5% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 43.0 | 3.75e-01 | 77.3% | 85.5% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 41.0 | 4.49e-01 | 84.5% | 87.7% |
| 1jswA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 48.0 | 4.27e-01 | 89.7% | 68.6% |
| 4q2cA01 | 1.10.3210.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.58 | 43.0 | 3.23e-01 | 80.4% | 93.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 50.0 | 4.95e-01 | 97.9% | 93.2% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.57 | 47.0 | 4.22e-01 | 90.7% | 87.0% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.56 | 42.0 | 3.85e-01 | 79.4% | 94.5% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 32.0 | 3.66e-01 | 89.7% | 79.1% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.56 | 46.0 | 3.91e-01 | 90.7% | 86.9% |
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 41.0 | 4.30e-01 | 81.4% | 87.4% |
| 3llkA02 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.54 | 40.0 | 3.57e-01 | 78.4% | 79.7% |
| 3tdgA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 39.0 | 3.58e-01 | 80.4% | 75.0% |
| 3llkA01 | 1.20.120.1960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain | 0.52 | 35.0 | 3.56e-01 | 70.1% | 78.6% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 45.0 | 4.10e-01 | 100.0% | 92.4% |
| 1hlbA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 45.0 | 3.83e-01 | 97.9% | 82.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942493 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.64 | 45.0 | 5.03e-01 | 96.9% | 96.0% |
| 5060163 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.60 | 37.0 | 4.33e-01 | 78.4% | 92.3% |
| 3700655 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 50.0 | 4.16e-01 | 93.8% | 84.2% |
| 5064398 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.57 | 49.0 | 4.87e-01 | 100.0% | 92.0% |
| 4034533 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.56 | 40.0 | 3.66e-01 | 75.3% | 58.5% |
| 4384958 | 2003.1.5.25 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB | 0.55 | 45.0 | 3.43e-01 | 89.7% | 85.4% |
| 4012790 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.55 | 42.0 | 3.01e-01 | 81.4% | 82.4% |
| 4987513 | 171.1.1.3 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_2 | 0.55 | 40.0 | 3.71e-01 | 77.3% | 82.4% |
| 4003130 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.54 | 44.0 | 3.85e-01 | 90.7% | 85.8% |
| 3602777 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.53 | 47.0 | 2.94e-01 | 100.0% | 75.6% |
| 4966460 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 40.0 | 4.04e-01 | 100.0% | 80.0% |
| 3841188 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.50 | 43.0 | 3.78e-01 | 97.9% | 68.7% |