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IMGVR_UViG_2529292698_000003-2529292698-2529621169

Arc-Vir

IMGVR_UViG_2529292698_000003-2529292698-2529621169

Identity

Kingdom:
archaea

Quality

87.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-121_274-384
PDB
Domain cluster: rep: LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00386__D54-120_289-389
D2 medium residues 122-259
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cwrA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 34.0 3.96e-01 97.8% 70.1%
1z5hA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.62 34.0 3.19e-01 99.3% 42.4%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.59 34.0 3.85e-01 98.6% 74.0%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.58 34.0 3.83e-01 100.0% 75.2%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 37.0 4.18e-01 97.8% 83.0%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 34.0 3.44e-01 98.6% 57.0%
4gx0B03 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.57 28.0 3.60e-01 98.6% 80.8%
4psrA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 34.0 3.66e-01 97.1% 69.7%
3jxoA00 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.55 27.0 3.36e-01 98.6% 75.0%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 3.71e-01 98.6% 65.8%
7q6gA01 3.30.1490.110 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.54 31.0 3.90e-01 100.0% 100.0%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 27.0 3.35e-01 81.2% 78.0%
3mb5A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 29.0 2.64e-01 99.3% 36.3%
4b6zA01 2.60.40.3120 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 30.0 3.25e-01 92.8% 66.4%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.53 38.0 2.54e-01 99.3% 20.2%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.52 35.0 3.50e-01 99.3% 65.2%
5c0oH00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 28.0 2.46e-01 98.6% 32.7%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 41.0 3.11e-01 87.7% 73.7%
3gwqA01 2.40.37.20 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain 0.50 34.0 3.15e-01 99.3% 53.4%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
184925 11.21.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › Tailspike_C 0.67 36.0 4.77e-01 97.8% 98.6%
5053995 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.66 32.0 4.21e-01 95.7% 84.0%
3744243 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.64 36.0 3.96e-01 98.6% 68.2%
5051013 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.60 33.0 3.78e-01 96.4% 70.5%
3856178 101.1.2.304 ↗ alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.60 26.0 3.81e-01 82.6% 93.3%
3681665 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.60 33.0 3.31e-01 99.3% 51.4%
5057583 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.59 30.0 2.89e-01 100.0% 40.6%
4224412 4261.1.1.1 ↗ a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C 0.58 29.0 3.37e-01 97.8% 65.3%
3728686 101.1.2.123 ↗ alpha arrays › HTH › HTH › winged helix domain › Paf67 0.57 29.0 3.80e-01 85.5% 92.9%
4955177 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 34.0 3.89e-01 98.6% 80.0%
5060311 4261.1.1.1 ↗ a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C 0.56 28.0 3.42e-01 98.6% 75.3%
3353067 101.1.2.37 ↗ alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.56 28.0 3.60e-01 77.5% 82.5%
3782494 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 28.0 3.75e-01 89.9% 92.0%
153293 11.1.5.22 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Collagen_bind 0.55 37.0 3.61e-01 98.6% 61.5%
3480319 304.113.1.1 ↗ a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain › GATase_2 0.54 30.0 3.34e-01 100.0% 67.3%
4983293 101.1.2.128 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.51 27.0 3.35e-01 87.7% 81.2%
3481360 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.51 31.0 2.98e-01 99.3% 52.3%