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IMGVR_UViG_2529293100_000004-2529293100-2531221084

Arc-Vir

Identity

Accession:: IMGVR_UViG_2529293100_000004-2529293100-2531221084 ↗
Kingdom:: archaea

Quality

92.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-93

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01609.28 best	DDE_Tnp_1	47.3	3.10e-12	94.6%	59.5%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7wjlA01	3.40.800.20	Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain	0.53	47.0	3.03e-01	100.0%	67.3%
4wghA00	3.20.20.100	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain	0.51	43.0	3.17e-01	100.0%	76.0%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4932086	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.82	74.0	5.68e-01	100.0%	45.0%
4962044	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.81	74.0	5.20e-01	100.0%	34.1%
5053144	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.80	72.0	4.89e-01	100.0%	33.7%
4950545	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.79	73.0	6.27e-01	100.0%	65.0%
5005291	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.79	72.0	5.41e-01	100.0%	45.0%
4961941	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.79	71.0	4.68e-01	100.0%	39.1%
4977119	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.79	72.0	5.33e-01	100.0%	45.8%
4966168	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.79	71.0	4.75e-01	100.0%	38.6%
3955806	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.78	71.0	5.83e-01	100.0%	58.2%
4974444	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.78	72.0	5.07e-01	100.0%	39.6%
4954372	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.77	70.0	4.91e-01	100.0%	38.2%
3953062	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.75	68.0	5.64e-01	100.0%	61.9%
5019203	2484.1.1.18 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1	0.68	61.0	4.51e-01	100.0%	39.6%
4997473	2002.1.1.120 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM	0.52	46.0	3.25e-01	100.0%	84.8%
4150748	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.51	44.0	3.76e-01	98.9%	84.4%
3287376	101.1.2.49 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C	0.51	31.0	2.56e-01	80.4%	30.9%
4962801	7516.1.1.24 ↗	a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3	0.51	41.0	3.28e-01	89.1%	100.0%