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IMGVR_UViG_2529293244_000002-2529293244-2531723280
Arc-VirIMGVR_UViG_2529293244_000002-2529293244-2531723280
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-109
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00127__D21-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05016.22 best | ParE_toxin | 26.1 | 1.40e-05 | 86.4% | 94.4% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.80 | 65.0 | 6.91e-01 | 90.3% | 97.8% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.78 | 62.0 | 6.60e-01 | 90.3% | 96.6% |
| 5cegD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.77 | 66.0 | 6.68e-01 | 89.3% | 98.0% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 59.0 | 6.32e-01 | 86.4% | 95.5% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 59.0 | 6.31e-01 | 87.4% | 97.7% |
| 1mwsA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.67 | 59.0 | 4.18e-01 | 100.0% | 92.4% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.64 | 46.0 | 4.78e-01 | 88.3% | 79.4% |
| 1k38A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 52.0 | 4.04e-01 | 99.0% | 88.7% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 41.0 | 2.82e-01 | 70.9% | 33.5% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 42.0 | 2.91e-01 | 76.7% | 42.4% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.57 | 49.0 | 3.65e-01 | 95.1% | 82.4% |
| 2xziA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 40.0 | 2.74e-01 | 73.8% | 82.1% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 49.0 | 3.41e-01 | 97.1% | 40.1% |
| 2b5nB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 38.0 | 2.73e-01 | 70.9% | 33.0% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 33.0 | 3.66e-01 | 84.5% | 76.5% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 28.0 | 3.17e-01 | 76.7% | 65.3% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 46.0 | 3.14e-01 | 98.1% | 93.8% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 45.0 | 3.10e-01 | 93.2% | 95.2% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.51 | 43.0 | 2.91e-01 | 97.1% | 94.6% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 38.0 | 3.85e-01 | 100.0% | 81.2% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4984297 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 69.0 | 7.37e-01 | 87.4% | 91.1% |
| 4949569 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 72.0 | 7.70e-01 | 92.2% | 96.7% |
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.86 | 62.0 | 7.05e-01 | 84.5% | 96.2% |
| 5044967 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 68.0 | 7.22e-01 | 90.3% | 95.6% |
| 4968316 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 63.0 | 6.86e-01 | 86.4% | 92.0% |
| 3589620 | 4312.1.1.11 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE-like_toxin | 0.83 | 67.0 | 7.19e-01 | 93.2% | 96.7% |
| 3986903 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 65.0 | 7.17e-01 | 82.5% | 98.8% |
| 5028295 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.81 | 68.0 | 7.10e-01 | 97.1% | 96.8% |
| 4937366 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 70.0 | 7.28e-01 | 96.1% | 98.9% |
| 4937737 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.79 | 61.0 | 6.66e-01 | 85.4% | 97.6% |
| 4544637 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 66.0 | 6.96e-01 | 88.3% | 96.8% |
| 4937945 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.79 | 72.0 | 7.27e-01 | 98.1% | 99.0% |
| 1712440 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 66.0 | 6.68e-01 | 88.3% | 96.1% |
| 2770566 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 64.0 | 6.71e-01 | 85.4% | 95.7% |
| 5052823 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.77 | 66.0 | 6.89e-01 | 90.3% | 97.9% |
| 3955980 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.77 | 72.0 | 7.15e-01 | 100.0% | 97.1% |
| 3165472 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.76 | 61.0 | 6.33e-01 | 83.5% | 92.6% |
| 5029970 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.76 | 67.0 | 6.90e-01 | 100.0% | 100.0% |
| 4463632 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 61.0 | 6.50e-01 | 88.3% | 97.8% |
| 4942674 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.74 | 48.0 | 5.76e-01 | 82.5% | 100.0% |
| 4992633 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.73 | 51.0 | 5.84e-01 | 88.3% | 98.7% |
| 5028231 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.72 | 66.0 | 6.44e-01 | 100.0% | 96.5% |
| 4968653 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.72 | 53.0 | 5.54e-01 | 87.4% | 83.2% |
| 2832769 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.71 | 65.0 | 6.19e-01 | 100.0% | 86.0% |
| 4993636 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.71 | 46.0 | 5.44e-01 | 83.5% | 98.6% |
| 4968138 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.70 | 51.0 | 5.42e-01 | 87.4% | 86.7% |
| 5081030 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.69 | 47.0 | 5.44e-01 | 82.5% | 96.0% |
| 4959385 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.68 | 47.0 | 5.33e-01 | 84.5% | 97.3% |
| 3589339 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.66 | 55.0 | 5.68e-01 | 92.2% | 96.8% |
| 4994079 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.65 | 44.0 | 5.04e-01 | 82.5% | 96.0% |
| 4966488 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.65 | 45.0 | 5.16e-01 | 86.4% | 100.0% |
| 5062732 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.64 | 46.0 | 5.00e-01 | 88.3% | 91.8% |
| 5040209 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.61 | 44.0 | 2.87e-01 | 74.8% | 40.9% |
| 3177736 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 45.0 | 2.85e-01 | 76.7% | 29.5% |
| 3723616 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.58 | 40.0 | 2.68e-01 | 71.8% | 35.2% |
| 4032161 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.58 | 36.0 | 4.33e-01 | 82.5% | 100.0% |
| 3392739 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.57 | 41.0 | 2.69e-01 | 73.8% | 21.6% |
| 4032029 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 40.0 | 4.14e-01 | 86.4% | 77.9% |
| 3740851 | 331.3.1.30 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3074 | 0.57 | 47.0 | 3.63e-01 | 89.3% | 94.3% |
| 3266526 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.57 | 50.0 | 4.56e-01 | 100.0% | 78.4% |
| 5040676 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 40.0 | 2.63e-01 | 74.8% | 27.0% |
| 3505062 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.54 | 39.0 | 3.54e-01 | 83.5% | 54.5% |
| 3975425 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.52 | 40.0 | 4.02e-01 | 81.6% | 90.5% |
| 3457086 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.52 | 41.0 | 3.07e-01 | 87.4% | 60.4% |
| 3995633 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.52 | 32.0 | 3.01e-01 | 95.1% | 48.5% |
| 4364087 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.51 | 40.0 | 3.90e-01 | 83.5% | 85.2% |
| 3536412 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 42.0 | 3.78e-01 | 88.3% | 65.7% |
| 4108772 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.51 | 32.0 | 3.75e-01 | 84.5% | 89.3% |
| 3977419 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.51 | 41.0 | 4.17e-01 | 85.4% | 98.0% |