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IMGVR_UViG_2547132058_000001-2547132058-2547232994

Arc-Vir

IMGVR_UViG_2547132058_000001-2547132058-2547232994

Identity

Kingdom:
archaea

Quality

93.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-51
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yfbA00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.84 66.0 6.31e-01 100.0% 75.0%
1mvfD00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.82 68.0 6.86e-01 100.0% 95.5%
3o27B00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.76 62.0 5.85e-01 100.0% 75.4%
2l66A00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.68 51.0 5.02e-01 100.0% 77.4%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.65 54.0 4.57e-01 100.0% 86.9%
2lpuA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 41.0 2.91e-01 84.4% 21.6%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.60 45.0 4.05e-01 82.2% 85.7%
2py6A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 40.0 2.77e-01 75.6% 35.0%
4gs5A01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.57 45.0 2.94e-01 93.3% 57.0%
3ke2B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.05e-01 71.1% 63.5%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 37.0 3.24e-01 71.1% 85.9%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 2.78e-01 73.3% 45.6%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 2.87e-01 77.8% 44.9%
4yfbC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.55 37.0 3.18e-01 71.1% 51.3%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 2.69e-01 71.1% 45.3%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 2.70e-01 73.3% 45.3%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.53 41.0 3.82e-01 100.0% 86.8%
2qa4I01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.53 44.0 4.22e-01 100.0% 83.6%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 40.0 3.01e-01 88.9% 56.0%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.52 42.0 2.74e-01 95.6% 83.8%
2mcqA01 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.52 37.0 3.27e-01 100.0% 48.0%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.52 40.0 3.45e-01 93.3% 65.5%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 2.73e-01 75.6% 50.0%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 2.55e-01 71.1% 42.9%
4cswA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.51 40.0 2.74e-01 100.0% 81.6%
3ec8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 39.0 3.00e-01 100.0% 51.8%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4993343 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.92 77.0 7.73e-01 97.8% 91.1%
4966971 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.92 75.0 7.00e-01 100.0% 72.7%
4982519 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.91 73.0 7.03e-01 100.0% 78.0%
5062781 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.90 78.0 7.88e-01 100.0% 95.6%
4930879 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.90 79.0 7.60e-01 100.0% 86.0%
4993826 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.90 76.0 7.51e-01 100.0% 87.5%
4085449 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.89 75.0 6.30e-01 100.0% 56.0%
4937994 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.89 70.0 7.35e-01 97.8% 95.0%
5032072 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.89 71.0 6.65e-01 100.0% 70.9%
4967714 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.89 72.0 6.54e-01 100.0% 66.7%
4994020 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.89 74.0 6.77e-01 100.0% 70.7%
5031154 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.89 76.0 6.89e-01 100.0% 71.7%
5050800 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.88 71.0 6.68e-01 100.0% 72.7%
5031005 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.88 70.0 6.53e-01 100.0% 70.9%
5080671 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.88 73.0 6.24e-01 100.0% 58.6%
4944882 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.88 76.0 7.33e-01 100.0% 86.0%
5078891 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.87 80.0 7.41e-01 100.0% 89.1%
4992635 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.87 74.0 7.28e-01 100.0% 87.8%
5032935 304.8.1.112 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin 0.87 71.0 4.99e-01 100.0% 30.4%
3984485 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.86 72.0 5.92e-01 100.0% 52.5%
5060420 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.86 72.0 7.24e-01 100.0% 93.3%
5027484 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.86 71.0 7.12e-01 100.0% 93.3%
5069260 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.86 73.0 7.09e-01 100.0% 86.0%
5050197 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.85 67.0 5.70e-01 100.0% 53.3%
4005331 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.85 70.0 6.85e-01 100.0% 84.0%
5010299 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.85 73.0 7.06e-01 100.0% 88.0%
4947865 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.85 70.0 6.86e-01 100.0% 86.0%
3503896 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.85 69.0 6.95e-01 97.8% 91.1%
5001623 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.85 72.0 6.96e-01 100.0% 86.0%
4933873 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 71.0 6.68e-01 100.0% 78.2%
4947224 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.84 72.0 6.99e-01 100.0% 88.0%
3280820 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.84 67.0 6.30e-01 100.0% 72.7%
4958102 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 74.0 6.51e-01 100.0% 67.7%
5076644 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.84 67.0 6.13e-01 100.0% 66.7%
4639978 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 65.0 6.13e-01 100.0% 70.9%
4962305 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.84 71.0 6.93e-01 100.0% 88.0%
4927110 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.83 69.0 6.95e-01 100.0% 95.6%
4941025 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.83 68.0 6.68e-01 100.0% 83.7%
5027722 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.83 68.0 6.85e-01 97.8% 93.3%
4942905 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.83 71.0 7.11e-01 100.0% 97.8%
4991794 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.83 70.0 6.78e-01 100.0% 86.0%
4992409 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.83 70.0 7.07e-01 100.0% 93.3%
5067548 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.82 69.0 6.99e-01 100.0% 95.6%
5074387 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.82 71.0 6.79e-01 100.0% 83.0%
4939022 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.82 71.0 6.90e-01 100.0% 90.0%
5029523 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.81 69.0 6.78e-01 97.8% 89.6%
4998594 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.80 63.0 6.38e-01 100.0% 88.9%
5057441 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.80 67.0 6.74e-01 97.8% 95.6%
5073296 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.80 68.0 6.69e-01 100.0% 90.0%
3590853 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.79 65.0 6.19e-01 100.0% 78.2%
4535331 1.1.3.3 beta barrels › cradle loop barrel › RIFT-related › AbrB › PrlF_antitoxin 0.79 63.0 5.37e-01 100.0% 54.7%
1948837 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.78 61.0 6.09e-01 100.0% 85.4%
4954534 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.78 66.0 6.45e-01 100.0% 92.0%
5071954 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.78 62.0 5.65e-01 100.0% 66.7%
5031988 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.77 61.0 5.97e-01 100.0% 82.0%
4959387 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 62.0 6.25e-01 100.0% 93.3%
5031039 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.77 60.0 6.08e-01 100.0% 88.9%
5024735 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.77 62.0 6.12e-01 100.0% 86.0%
4992345 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.76 58.0 5.88e-01 100.0% 86.7%
3326674 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.74 64.0 6.02e-01 100.0% 87.3%
3373308 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.69 57.0 5.18e-01 100.0% 72.3%
3494653 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.66 52.0 3.56e-01 88.9% 26.3%
3361337 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.66 47.0 4.85e-01 80.0% 89.7%
3439923 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.65 53.0 4.64e-01 100.0% 61.3%
4941368 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.65 47.0 5.08e-01 80.0% 100.0%
3467262 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.65 50.0 3.72e-01 97.8% 41.4%
5012493 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.64 46.0 4.64e-01 91.1% 82.2%
5028056 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.64 49.0 4.64e-01 100.0% 70.0%
3309149 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.62 48.0 4.33e-01 84.4% 60.0%
3583595 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.61 39.0 3.67e-01 75.6% 48.3%
3439924 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.61 46.0 4.61e-01 100.0% 87.8%
3994423 389.1.1.1 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF 0.57 37.0 3.46e-01 82.2% 50.0%
4050317 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 40.0 3.04e-01 77.8% 56.8%
3721289 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.57 39.0 3.46e-01 77.8% 47.1%
5038619 5.1.5.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 0.56 42.0 2.51e-01 91.1% 17.3%
3604277 327.11.2.82 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 0.53 35.0 3.14e-01 75.6% 42.7%
4889773 3114.1.1.1 beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP 0.51 37.0 3.05e-01 75.6% 52.5%
4677734 1.1.5.44 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head 0.51 43.0 3.07e-01 100.0% 35.2%
4945049 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 34.0 2.87e-01 80.0% 34.7%
4384848 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 39.0 2.82e-01 95.6% 68.5%