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IMGVR_UViG_2554235474_000003-2554235474-2556086860

Arc-Vir

IMGVR_UViG_2554235474_000003-2554235474-2556086860

Identity

Kingdom:
archaea

Quality

94.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 147-184
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.83 66.0 4.03e-01 100.0% 15.0%
3it8D01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.75 55.0 3.48e-01 100.0% 16.7%
1tk7A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.74 47.0 4.76e-01 97.4% 64.9%
3lidA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.73 53.0 3.65e-01 100.0% 22.4%
6u5uG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.70 52.0 3.62e-01 100.0% 24.2%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.69 61.0 4.01e-01 100.0% 36.9%
3lzwA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 47.0 3.37e-01 100.0% 23.5%
1lgpA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.67 57.0 4.09e-01 100.0% 37.2%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 57.0 4.16e-01 100.0% 61.0%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 55.0 4.04e-01 100.0% 71.2%
1fl2A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 45.0 3.27e-01 100.0% 23.4%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.22e-01 100.0% 49.3%
3itjA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 46.0 3.29e-01 100.0% 23.8%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.63 49.0 3.86e-01 100.0% 41.8%
4kh9A01 2.60.40.3870 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF16024, DUF4785 0.63 50.0 3.61e-01 100.0% 48.5%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.62 41.0 3.98e-01 100.0% 54.3%
4frfA00 3.30.470.160 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase 0.62 52.0 3.29e-01 100.0% 65.0%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.61 50.0 3.83e-01 100.0% 82.0%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.60 51.0 3.17e-01 100.0% 85.1%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 3.77e-01 100.0% 64.2%
1jnrA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 2.90e-01 100.0% 33.8%
6yllA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 39.0 3.19e-01 100.0% 32.9%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 3.78e-01 100.0% 63.6%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.56 49.0 3.50e-01 100.0% 34.5%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 3.66e-01 100.0% 74.1%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 2.61e-01 97.4% 13.0%
4g4sP00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.54 46.0 2.96e-01 100.0% 28.9%
4f80A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.42e-01 100.0% 60.2%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 41.0 3.45e-01 100.0% 48.6%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 39.0 2.45e-01 100.0% 30.5%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.25e-01 100.0% 62.6%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 43.0 3.64e-01 100.0% 56.9%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.51 39.0 2.65e-01 100.0% 19.4%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939488 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.90 81.0 4.71e-01 100.0% 13.1%
5029084 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.88 74.0 4.50e-01 100.0% 16.0%
4492006 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.86 74.0 4.37e-01 100.0% 13.7%
4988803 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.83 70.0 3.97e-01 100.0% 9.4%
5036329 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.83 69.0 4.19e-01 100.0% 15.3%
4982659 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.82 70.0 4.00e-01 100.0% 10.6%
3089543 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.82 70.0 4.37e-01 100.0% 19.4%
5073475 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.82 69.0 4.05e-01 100.0% 11.9%
5041307 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.81 68.0 4.06e-01 100.0% 13.8%
5005271 2484.1.1.68 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.78 66.0 4.35e-01 100.0% 25.3%
3717251 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.53e-01 100.0% 74.5%
3264538 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.67 57.0 3.35e-01 97.4% 19.3%
3413048 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.67 48.0 2.71e-01 100.0% 6.2%
3391411 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 53.0 5.31e-01 100.0% 90.0%
3563753 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.65 54.0 3.86e-01 100.0% 65.6%
9261 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.65 45.0 3.25e-01 100.0% 23.0%
3476809 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.64 53.0 3.18e-01 97.4% 18.3%
3220575 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.62 50.0 2.96e-01 97.4% 18.4%
1117748 1.1.13.19 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N 0.62 50.0 3.80e-01 100.0% 81.7%
3733001 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.62 49.0 2.91e-01 94.7% 19.1%
3501741 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.61 44.0 3.97e-01 100.0% 53.3%
3550161 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.61 45.0 3.26e-01 100.0% 26.1%
3992928 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.60 49.0 3.59e-01 100.0% 35.8%
3498616 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.60 50.0 3.66e-01 100.0% 47.0%
4261822 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.60 44.0 2.90e-01 97.4% 17.8%
3738655 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.59 49.0 2.98e-01 97.4% 21.9%
3555174 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.59 49.0 3.65e-01 100.0% 38.1%
3785552 330.3.1.1 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › RF-1 0.59 52.0 3.47e-01 100.0% 27.1%
3600423 206.1.2.3 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK 0.59 45.0 2.79e-01 94.7% 21.2%
3546694 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.58 49.0 3.56e-01 100.0% 48.3%
4017879 3385.1.1.0 beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 0.58 48.0 3.45e-01 100.0% 35.8%
3205743 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.57 47.0 3.30e-01 100.0% 30.0%
5031452 2484.1.1.18 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.57 48.0 3.67e-01 100.0% 45.3%
3739035 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 43.0 3.83e-01 92.1% 60.0%
3889649 11.1.1.607 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PCDH15_12th 0.55 46.0 3.31e-01 100.0% 63.3%
3248039 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 42.0 3.23e-01 89.5% 78.0%
3776724 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.54 45.0 2.74e-01 100.0% 13.8%
3785904 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 41.0 3.91e-01 92.1% 72.0%
4937420 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 43.0 2.48e-01 100.0% 7.7%
4823230 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 46.0 3.60e-01 100.0% 46.9%
4116939 2004.1.1.525 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B 0.53 41.0 2.32e-01 92.1% 93.2%
3174350 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 41.0 3.56e-01 94.7% 55.4%
4101910 376.1.3.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.51 41.0 2.87e-01 100.0% 24.8%
None 0.51 41.0 2.80e-01 100.0% 24.0%
4619943 376.1.3.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.51 41.0 2.90e-01 100.0% 26.7%
3553448 376.1.3.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.51 41.0 3.27e-01 100.0% 42.4%
3264168 376.1.3.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.50 40.0 2.84e-01 100.0% 26.7%
4929549 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 41.0 3.16e-01 97.4% 51.6%
D2 medium residues 1-41_106-142
PDB
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.80 74.0 7.20e-01 100.0% 95.3%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 63.0 5.84e-01 97.4% 92.9%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 61.0 5.32e-01 97.4% 72.4%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.69 37.0 3.57e-01 76.9% 45.6%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 62.0 5.29e-01 100.0% 79.0%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 60.0 5.51e-01 96.2% 91.9%
4qclA01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 63.0 6.10e-01 100.0% 97.7%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 62.0 6.18e-01 100.0% 97.5%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 60.0 4.87e-01 98.7% 58.2%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 58.0 5.26e-01 97.4% 77.7%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 59.0 4.32e-01 100.0% 50.2%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 42.0 4.48e-01 96.2% 73.9%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 49.0 4.20e-01 83.3% 94.6%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 58.0 4.73e-01 100.0% 82.4%
4me3A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 56.0 5.22e-01 96.2% 83.5%
4egvA02 2.40.50.840 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 51.0 5.24e-01 93.6% 92.0%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 48.0 4.36e-01 82.1% 100.0%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 54.0 4.83e-01 98.7% 89.6%
2vqeL00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 53.0 4.57e-01 96.2% 60.5%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 40.0 4.27e-01 97.4% 77.9%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 53.0 4.71e-01 100.0% 88.6%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 44.0 3.88e-01 80.8% 91.1%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.59 51.0 5.10e-01 97.4% 95.1%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 37.0 4.00e-01 91.0% 75.4%
3rcyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 47.0 3.98e-01 91.0% 68.1%
3cawA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 42.0 4.06e-01 76.9% 73.6%
2k5wA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.58 50.0 4.55e-01 100.0% 82.0%
2x8fA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 46.0 3.03e-01 96.2% 20.6%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.72e-01 96.2% 48.8%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 45.0 3.78e-01 91.0% 72.2%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 41.0 2.73e-01 79.5% 20.6%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 44.0 3.71e-01 89.7% 69.7%
2qdeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 46.0 3.85e-01 92.3% 70.6%
2gaiA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.55 41.0 3.54e-01 79.5% 84.6%
3i6eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 45.0 4.12e-01 89.7% 85.4%
2oivA00 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.55 43.0 3.34e-01 84.6% 57.6%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 45.0 3.96e-01 92.3% 78.2%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 44.0 4.01e-01 89.7% 97.2%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 45.0 4.04e-01 93.6% 91.3%
1f9cA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 45.0 3.96e-01 93.6% 79.5%
2gdqA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 44.0 4.04e-01 91.0% 86.9%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 42.0 3.86e-01 88.5% 96.4%
2oqhA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 43.0 3.86e-01 89.7% 76.3%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 43.0 3.93e-01 89.7% 97.2%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 45.0 3.89e-01 96.2% 97.7%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 44.0 3.30e-01 88.5% 65.0%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 42.0 3.71e-01 91.0% 81.6%
2gl5A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 42.0 3.63e-01 89.7% 74.4%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.53 39.0 3.09e-01 79.5% 88.3%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 44.0 3.95e-01 93.6% 85.6%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 42.0 3.54e-01 91.0% 66.0%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 34.0 3.55e-01 93.6% 71.6%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 42.0 3.82e-01 89.7% 86.8%
3sszA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 43.0 3.63e-01 93.6% 82.7%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 41.0 3.07e-01 87.2% 64.5%
4h7wA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.51 37.0 2.96e-01 80.8% 88.2%
3eb7A03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.51 43.0 3.30e-01 97.4% 82.2%
5iroD00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 34.0 3.18e-01 94.9% 54.9%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939488 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.92 70.0 4.50e-01 97.4% 21.0%
3350050 2.1.1.25 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.90 85.0 6.69e-01 100.0% 76.6%
4001702 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.89 83.0 7.15e-01 98.7% 88.7%
4942684 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.87 81.0 6.05e-01 98.7% 98.8%
5012082 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.84 78.0 7.25e-01 100.0% 97.9%
4976869 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.81 76.0 6.54e-01 100.0% 96.5%
5025207 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.81 73.0 7.08e-01 96.2% 98.8%
3577957 5.1.3.99 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP_3 0.74 42.0 2.62e-01 85.9% 11.3%
5000724 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 65.0 6.09e-01 96.2% 91.6%
3444970 2.1.1.223 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.73 67.0 5.60e-01 100.0% 78.5%
3166240 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 53.0 5.95e-01 82.1% 100.0%
4014971 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 66.0 5.50e-01 100.0% 75.4%
3446498 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.72 64.0 5.31e-01 100.0% 75.7%
3784708 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.72 63.0 6.11e-01 93.6% 88.2%
3194612 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.72 65.0 5.28e-01 100.0% 67.6%
3411413 2.1.1.119 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM10_OB 0.72 64.0 4.95e-01 98.7% 53.5%
3789376 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.71 64.0 5.39e-01 100.0% 75.4%
3667340 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.71 62.0 5.29e-01 96.2% 76.0%
4025118 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 63.0 5.21e-01 100.0% 66.7%
4945682 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 63.0 5.34e-01 100.0% 79.2%
3446499 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.69 62.0 5.40e-01 100.0% 84.2%
437095 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 61.0 5.32e-01 97.4% 72.4%
3830552 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 62.0 5.09e-01 100.0% 75.0%
3870119 2.1.1.119 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM10_OB 0.69 61.0 4.78e-01 98.7% 54.5%
4028113 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.69 61.0 5.05e-01 100.0% 72.9%
3287532 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 5.57e-01 97.4% 82.0%
4449302 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 61.0 5.49e-01 97.4% 75.2%
4964647 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 60.0 5.78e-01 97.4% 98.9%
3366703 2.1.1.157 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 0.68 61.0 5.06e-01 98.7% 69.6%
5030410 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 59.0 5.54e-01 94.9% 86.3%
5061147 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 42.0 4.01e-01 98.7% 51.6%
3744517 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.68 51.0 4.42e-01 80.8% 90.0%
3991931 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.67 60.0 5.19e-01 100.0% 80.0%
3931674 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 59.0 5.22e-01 100.0% 86.1%
3807621 2.1.1.348 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223, Rep-A_N 0.67 59.0 4.07e-01 100.0% 37.1%
3935835 2.1.1.68 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.67 56.0 4.71e-01 96.2% 77.1%
3625857 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 58.0 4.98e-01 100.0% 76.9%
3441179 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.66 59.0 5.06e-01 100.0% 80.0%
3356276 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 59.0 5.07e-01 100.0% 81.6%
4954093 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.66 59.0 5.06e-01 100.0% 81.6%
3257603 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.66 52.0 4.58e-01 87.2% 95.8%
3934534 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 55.0 4.62e-01 96.2% 75.7%
3880705 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.65 50.0 4.30e-01 83.3% 94.4%
4026723 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 58.0 5.17e-01 100.0% 86.4%
3719807 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.65 49.0 4.09e-01 82.1% 97.1%
3954042 2.1.1.94 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C 0.65 52.0 5.33e-01 93.6% 91.9%
3937661 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 42.0 4.59e-01 96.2% 81.5%
1117747 2.1.1.94 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C 0.63 51.0 5.24e-01 93.6% 92.0%
3277370 216.1.1.14 a+b two layers › UBC-like › UBC-like › UBC-like › Med1 0.63 38.0 2.86e-01 76.9% 25.5%
3968190 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 53.0 4.95e-01 92.3% 95.8%
5046188 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 52.0 5.33e-01 92.3% 96.0%
5049738 2.1.1.94 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C 0.61 51.0 5.07e-01 91.0% 91.3%
3368743 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 41.0 4.48e-01 96.2% 90.0%
3952939 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.60 42.0 4.29e-01 71.8% 81.3%
4029930 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 44.0 4.03e-01 79.5% 89.5%
3484671 3433.1.1.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain 0.59 31.0 3.68e-01 78.2% 76.0%
5028935 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 37.0 3.86e-01 82.1% 71.4%
3328840 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.58 40.0 3.98e-01 93.6% 68.2%
3365937 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.57 40.0 4.44e-01 96.2% 93.3%
4103142 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.57 42.0 4.25e-01 96.2% 78.8%
3701911 5.1.2.33 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.56 43.0 3.17e-01 83.3% 37.3%
4375028 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.56 43.0 3.67e-01 80.8% 86.4%
3618049 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.56 45.0 3.48e-01 88.5% 93.0%
2859147 7091.1.1.1 a+b complex topology › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › C-terminal domain of DNA repair helicase RadD › PF29401 0.56 49.0 4.03e-01 100.0% 72.7%
2544590 2.1.1.58 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF35_N 0.56 45.0 3.92e-01 94.9% 57.6%
3234621 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 42.0 3.52e-01 98.7% 45.9%
3961460 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 48.0 3.92e-01 97.4% 72.0%
5025423 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.55 45.0 4.03e-01 89.7% 80.0%
869258 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.55 45.0 4.05e-01 92.3% 83.8%
422486 705.1.1.1 beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH 0.55 44.0 4.01e-01 89.7% 97.2%
3501494 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 4.04e-01 94.9% 85.6%
3619246 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 39.0 3.55e-01 89.7% 56.2%
3492710 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.54 36.0 3.87e-01 94.9% 84.6%
180375 705.1.1.1 beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH 0.54 43.0 3.93e-01 89.7% 97.2%
3872766 298.1.1.12 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Biliv-reduc_cat 0.53 36.0 3.08e-01 82.1% 44.0%
3469587 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 43.0 2.83e-01 89.7% 24.3%
3958768 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 37.0 3.71e-01 74.4% 76.2%
344114 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 43.0 3.73e-01 92.3% 80.6%
3505182 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 43.0 4.32e-01 92.3% 100.0%
4934871 2.1.1.368 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Arcadin_1 0.52 44.0 3.96e-01 96.2% 100.0%
4534466 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.52 40.0 3.76e-01 96.2% 68.4%
3231629 7579.1.1.14 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.52 44.0 2.94e-01 94.9% 89.8%
4604481 12.3.1.8 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.52 40.0 2.83e-01 83.3% 79.6%
5004264 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 44.0 3.79e-01 94.9% 91.1%
5000180 7504.1.1.2 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.51 44.0 3.50e-01 97.4% 86.7%
5023892 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.50 43.0 3.65e-01 94.9% 89.1%
D3 medium residues 42-105
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k59A02 3.30.70.2250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif 0.78 70.0 6.89e-01 100.0% 100.0%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.75 66.0 5.74e-01 100.0% 80.8%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 62.0 5.59e-01 100.0% 92.4%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.72 64.0 5.64e-01 100.0% 76.3%
4ch7A02 3.30.70.3460 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 63.0 4.54e-01 100.0% 39.2%
1nxiA00 3.30.70.970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like 0.71 60.0 4.88e-01 100.0% 59.1%
2bbeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 62.0 5.32e-01 100.0% 87.4%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 60.0 5.24e-01 100.0% 70.9%
1u7lA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 62.0 5.54e-01 100.0% 77.8%
4zosB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 61.0 5.37e-01 100.0% 92.8%
3k17A02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.69 61.0 4.75e-01 100.0% 97.9%
4pcqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.69 61.0 5.57e-01 100.0% 85.7%
2od4B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 60.0 5.43e-01 100.0% 95.5%
2zbcA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.69 59.0 5.73e-01 100.0% 94.5%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 60.0 5.19e-01 100.0% 92.2%
3hx9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 60.0 5.24e-01 100.0% 91.8%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 59.0 5.16e-01 100.0% 89.1%
2fb0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 59.0 5.27e-01 100.0% 93.6%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 59.0 5.19e-01 100.0% 92.9%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.68 59.0 4.87e-01 100.0% 94.1%
2cqiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 60.0 5.11e-01 100.0% 73.8%
3h0lA00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.67 53.0 3.22e-01 90.6% 38.7%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.67 59.0 4.26e-01 100.0% 90.7%
2cpxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 59.0 5.50e-01 100.0% 98.7%
2jsxA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.66 57.0 5.55e-01 100.0% 95.8%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 5.07e-01 100.0% 89.7%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 5.03e-01 98.4% 92.7%
2dnhA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 58.0 4.97e-01 100.0% 78.1%
1x7vA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 5.03e-01 100.0% 90.8%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.66 57.0 5.00e-01 100.0% 71.7%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.66 57.0 5.00e-01 100.0% 73.5%
2op5B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 4.98e-01 100.0% 97.0%
2jdjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 56.0 4.89e-01 100.0% 89.4%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.65 53.0 4.42e-01 90.6% 55.7%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 57.0 5.03e-01 100.0% 96.9%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 57.0 5.34e-01 100.0% 93.7%
2dgrA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 53.0 5.27e-01 92.2% 94.0%
1xppD00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.65 52.0 4.57e-01 90.6% 62.4%
3nwgA02 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.65 55.0 4.87e-01 100.0% 75.2%
4hl9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 56.0 5.00e-01 100.0% 94.7%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 53.0 4.57e-01 93.8% 64.8%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 57.0 5.27e-01 100.0% 89.0%
1q8bA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 56.0 5.02e-01 100.0% 94.6%
3smzA03 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 57.0 5.01e-01 100.0% 80.4%
1m0sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 55.0 5.36e-01 100.0% 91.7%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.65 53.0 4.65e-01 93.8% 88.0%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 53.0 5.20e-01 96.9% 100.0%
6c6uN00 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.64 55.0 4.85e-01 100.0% 80.6%
1gpjA01 3.30.460.30 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain 0.64 55.0 4.32e-01 100.0% 49.7%
3gfhA01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.64 52.0 4.47e-01 93.8% 60.9%
2f9jA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 56.0 5.24e-01 100.0% 93.8%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.64 53.0 4.84e-01 96.9% 100.0%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 54.0 5.16e-01 100.0% 94.9%
3s1tA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 55.0 5.17e-01 100.0% 97.5%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.64 53.0 4.57e-01 100.0% 84.8%
2dnnA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 56.0 5.17e-01 100.0% 93.9%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 54.0 5.16e-01 100.0% 96.2%
3n79A01 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.64 53.0 5.09e-01 100.0% 88.5%
6ruiK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.63 51.0 4.44e-01 92.2% 62.1%
2dgwA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 56.0 5.19e-01 100.0% 93.8%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 55.0 5.29e-01 100.0% 91.9%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 53.0 4.85e-01 100.0% 82.2%
4oi3A00 3.30.70.3090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer 0.63 53.0 5.00e-01 100.0% 90.1%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.63 54.0 4.47e-01 100.0% 78.5%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 54.0 5.00e-01 100.0% 78.8%
2n3lA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 53.0 4.89e-01 100.0% 84.3%
7ocxC01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 53.0 5.01e-01 95.3% 100.0%
1xocA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.62 50.0 4.16e-01 92.2% 68.3%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 52.0 4.87e-01 100.0% 92.9%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.62 51.0 4.81e-01 100.0% 89.4%
2fgeA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.62 52.0 3.58e-01 100.0% 72.5%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 53.0 4.81e-01 100.0% 93.4%
1s79A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 51.0 4.47e-01 100.0% 76.7%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.60 49.0 4.52e-01 93.8% 87.1%
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 51.0 4.53e-01 100.0% 89.7%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.60 51.0 4.69e-01 100.0% 84.1%
4pfyA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.60 47.0 3.75e-01 92.2% 53.1%
3orqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 48.0 3.41e-01 92.2% 42.7%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 5.05e-01 100.0% 98.5%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.78e-01 100.0% 89.2%
5ixuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.23e-01 100.0% 87.3%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.56 44.0 4.17e-01 93.8% 95.3%
4rjzA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 43.0 3.19e-01 92.2% 82.1%
3g8wB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 37.0 2.87e-01 75.0% 29.3%
1yreC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 38.0 2.91e-01 82.8% 76.4%
1htwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 3.19e-01 92.2% 100.0%
3ekiA01 3.40.190.180 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Cypl, domain I 0.51 40.0 3.07e-01 93.8% 83.5%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968783 304.114.1.1 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › DNApolII_insertion 0.80 72.0 7.04e-01 100.0% 95.7%
3501565 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.78 70.0 5.33e-01 100.0% 46.2%
4246268 304.4.1.20 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 0.72 63.0 5.56e-01 100.0% 77.9%
4929060 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.72 63.0 5.47e-01 100.0% 71.0%
4116209 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.72 63.0 5.68e-01 100.0% 82.2%
3942261 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.72 64.0 5.52e-01 100.0% 90.0%
3715105 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.71 62.0 5.68e-01 96.9% 83.5%
3961062 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.71 63.0 5.65e-01 100.0% 98.9%
1481299 304.5.1.4 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec 0.71 62.0 5.19e-01 100.0% 85.8%
3719186 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.71 62.0 4.26e-01 96.9% 33.0%
3496728 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.70 61.0 5.49e-01 100.0% 82.2%
3323407 304.126.1.2 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.70 62.0 5.27e-01 100.0% 67.6%
3922306 4323.1.1.2 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.70 62.0 4.01e-01 100.0% 24.1%
3614838 304.126.1.2 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.70 62.0 5.42e-01 100.0% 73.7%
5046778 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.70 60.0 5.26e-01 100.0% 75.0%
4976641 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 60.0 5.78e-01 100.0% 90.7%
4050535 304.126.1.2 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.69 61.0 4.89e-01 100.0% 54.6%
3997340 4323.1.1.2 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.69 61.0 4.01e-01 100.0% 27.8%
4189847 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 61.0 4.70e-01 100.0% 62.1%
3184298 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 59.0 5.69e-01 98.4% 97.3%
3587109 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.69 60.0 5.42e-01 100.0% 74.4%
3980590 304.13.1.1 a+b two layers › Alpha-beta plaits › Hypothetical protein VC0424 › Hypothetical protein VC0424 › RraB 0.69 59.0 5.10e-01 100.0% 74.3%
5160 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.69 60.0 5.19e-01 100.0% 92.2%
3287505 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.69 60.0 5.06e-01 100.0% 80.9%
1168087 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.68 60.0 5.05e-01 100.0% 82.6%
4105022 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.68 58.0 5.29e-01 100.0% 77.8%
3289186 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.68 58.0 5.06e-01 96.9% 90.0%
4034033 304.28.1.13 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL 0.68 60.0 4.45e-01 100.0% 58.8%
4225218 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.68 59.0 4.80e-01 100.0% 72.0%
4995222 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.68 59.0 5.67e-01 100.0% 98.7%
3284747 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.68 59.0 5.30e-01 98.4% 88.9%
3587356 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.68 58.0 5.27e-01 100.0% 77.8%
4153244 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 57.0 5.60e-01 98.4% 98.6%
4399086 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.68 57.0 5.33e-01 100.0% 80.0%
3692676 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.68 59.0 5.21e-01 100.0% 94.7%
3962574 5067.1.1.0 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.67 57.0 3.49e-01 100.0% 18.9%
5061711 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.67 57.0 5.20e-01 100.0% 80.9%
3278264 304.28.1.13 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › MMPL 0.67 56.0 4.87e-01 98.4% 85.7%
1039103 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.66 57.0 5.09e-01 100.0% 94.7%
4932197 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.66 57.0 5.62e-01 100.0% 94.3%
4937853 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.66 55.0 5.41e-01 93.8% 94.3%
3619480 304.9.1.77 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 0.66 58.0 4.75e-01 100.0% 63.3%
4963170 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.66 56.0 5.11e-01 100.0% 77.8%
1189981 304.30.1.1 a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A 0.66 55.0 5.04e-01 100.0% 76.1%
3616450 304.9.1.77 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 0.66 58.0 5.03e-01 100.0% 76.0%
3716566 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 58.0 4.59e-01 100.0% 77.8%
3830475 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.66 57.0 5.17e-01 100.0% 73.3%
5066723 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.66 53.0 4.71e-01 90.6% 66.3%
4394754 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.66 56.0 5.07e-01 100.0% 74.4%
5038487 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.66 57.0 5.17e-01 100.0% 78.9%
4957896 304.3.1.4 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D 0.66 56.0 5.10e-01 100.0% 83.3%
317401 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.65 57.0 4.96e-01 100.0% 90.0%
4977599 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.65 54.0 4.99e-01 93.8% 84.5%
5033573 304.4.1.75 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD 0.65 55.0 4.96e-01 100.0% 85.3%
3783146 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.65 57.0 5.02e-01 100.0% 84.2%
166656 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.65 56.0 5.07e-01 100.0% 78.9%
4928630 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.65 53.0 4.79e-01 92.2% 71.1%
4943823 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.65 53.0 5.01e-01 93.8% 87.5%
4618856 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.65 52.0 4.56e-01 90.6% 63.0%
3609138 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 56.0 4.76e-01 100.0% 68.2%
136198 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.65 53.0 4.37e-01 92.2% 54.6%
5035806 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.65 51.0 4.65e-01 89.1% 68.9%
5040160 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.65 52.0 4.55e-01 90.6% 64.0%
5072399 305.1.1.0 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.64 53.0 4.70e-01 92.2% 68.1%
5046930 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.64 52.0 4.62e-01 90.6% 66.3%
4947398 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 55.0 5.32e-01 100.0% 96.0%
3444134 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.64 57.0 5.09e-01 100.0% 93.3%
5063265 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.64 55.0 5.30e-01 100.0% 93.3%
5052336 304.4.1.75 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › GYD 0.64 53.0 4.80e-01 100.0% 84.2%
5080240 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.64 52.0 4.70e-01 92.2% 71.1%
3803779 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.64 55.0 5.26e-01 100.0% 86.7%
4523483 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.64 55.0 5.27e-01 100.0% 96.0%
4980617 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.64 55.0 5.20e-01 100.0% 89.9%
3995009 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.64 54.0 4.95e-01 95.3% 100.0%
4173219 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.64 54.0 4.92e-01 100.0% 76.7%
3931019 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 56.0 4.65e-01 100.0% 71.3%
4975141 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.63 55.0 5.25e-01 100.0% 97.3%
161827 304.9.1.77 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 0.63 56.0 4.98e-01 100.0% 82.4%
4524153 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.63 54.0 5.00e-01 100.0% 75.3%
5034637 305.1.1.2 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.63 51.0 4.83e-01 92.2% 80.0%
3904001 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 54.0 4.85e-01 95.3% 98.9%
3168930 304.126.1.1 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.63 52.0 4.82e-01 100.0% 84.4%
3992422 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 55.0 4.46e-01 100.0% 71.2%
5041003 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.63 54.0 5.11e-01 100.0% 92.3%
3587788 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.63 53.0 4.49e-01 100.0% 85.2%
4934117 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 48.0 4.48e-01 87.5% 74.1%
1205842 325.1.1.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like 0.62 53.0 5.03e-01 96.9% 86.8%
3216225 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 55.0 4.84e-01 100.0% 85.3%
4977421 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.62 53.0 5.18e-01 100.0% 98.6%
4934659 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.62 51.0 4.49e-01 100.0% 63.8%
5021879 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.62 52.0 5.12e-01 98.4% 97.1%
3823560 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 54.0 4.76e-01 100.0% 100.0%
3997878 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 50.0 4.77e-01 92.2% 97.3%
5003801 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 49.0 4.95e-01 93.8% 100.0%
4150055 304.5.1.5 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › HisG_C 0.60 52.0 4.89e-01 100.0% 89.9%
3728308 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 52.0 4.58e-01 100.0% 81.0%
5039113 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.60 49.0 4.90e-01 96.9% 98.5%
4938424 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 49.0 4.89e-01 93.8% 100.0%
5047334 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 49.0 4.43e-01 100.0% 76.8%
3830533 390.1.1.6 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 0.56 39.0 3.39e-01 73.4% 49.0%