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IMGVR_UViG_2554235474_000003-2554235474-2556086880

Arc-Vir

IMGVR_UViG_2554235474_000003-2554235474-2556086880

Identity

Kingdom:
archaea

Quality

80.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-77
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jl6101 2.20.150.30 Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › 0.58 33.0 3.80e-01 100.0% 79.1%
1wgmA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 41.0 4.01e-01 84.6% 71.2%
2czrA02 3.90.79.30 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain 0.56 46.0 3.83e-01 93.8% 67.5%
3fgtA01 2.10.70.60 Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 0.55 31.0 3.30e-01 92.3% 61.8%
4tm5A01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.53 36.0 2.90e-01 70.8% 49.2%
4dyoA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.52 37.0 3.03e-01 80.0% 77.0%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3653237 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.61 44.0 4.22e-01 83.1% 66.7%
3998575 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 45.0 4.03e-01 84.6% 57.9%
4996272 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 39.0 4.03e-01 80.0% 75.0%
5076810 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 39.0 3.97e-01 75.4% 71.4%
3886475 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 43.0 4.57e-01 81.5% 98.2%
4975593 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 39.0 3.62e-01 81.5% 55.3%
4946175 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 39.0 3.76e-01 81.5% 62.7%
5071881 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.56 37.0 3.84e-01 73.8% 73.3%
3998594 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 38.0 3.69e-01 80.0% 61.3%
3596561 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 37.0 3.70e-01 81.5% 64.3%
7677 4977.1.1.1 ↗ a+b complex topology › TBP-interacting protein C-terminal domain-like › TBP-interacting protein C-terminal domain-like › TBP-interacting protein C-terminal domain-like › TBPIP_C 0.56 46.0 3.85e-01 93.8% 68.6%
3389022 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.56 38.0 4.21e-01 81.5% 94.0%
3243064 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.55 43.0 4.06e-01 84.6% 75.0%
3392386 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.55 38.0 3.86e-01 83.1% 73.8%
4338085 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 34.0 3.80e-01 83.1% 88.9%
3480920 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.55 43.0 3.63e-01 87.7% 60.0%
3476530 376.1.1.8 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.55 42.0 4.27e-01 86.2% 84.6%
4977742 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.54 36.0 3.39e-01 78.5% 52.9%
4329890 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.54 34.0 2.65e-01 83.1% 26.7%
4522265 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 33.0 3.80e-01 81.5% 97.5%
3221216 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.54 43.0 3.71e-01 86.2% 61.0%
4222282 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 33.0 3.35e-01 81.5% 61.5%
3171121 2496.1.1.2 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.52 37.0 2.77e-01 93.8% 26.8%
3221156 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.52 32.0 3.41e-01 72.3% 72.7%
4979481 304.110.1.0 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.51 35.0 3.21e-01 73.8% 88.9%
4953034 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 31.0 3.51e-01 83.1% 88.9%
4946824 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 2.75e-01 86.2% 70.9%
3787718 376.1.1.15 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.50 38.0 3.46e-01 86.2% 61.1%