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IMGVR_UViG_2554235474_000003-2554235474-2556086902

Arc-Vir

IMGVR_UViG_2554235474_000003-2554235474-2556086902

Identity

Kingdom:
archaea

Quality

84.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-102
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19118.6 best DUF5802 59.8 3.60e-16 100.0% 93.8%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 62.0 6.68e-01 85.1% 100.0%
1cr5A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.78 57.0 6.49e-01 80.2% 100.0%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.76 61.0 6.31e-01 96.0% 89.6%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.76 59.0 6.46e-01 83.2% 100.0%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.76 59.0 6.45e-01 81.2% 100.0%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.73 54.0 5.61e-01 77.2% 100.0%
1cz4A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.72 61.0 6.38e-01 93.1% 100.0%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.72 65.0 5.81e-01 99.0% 85.2%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.72 60.0 6.04e-01 91.1% 100.0%
6cz7C02 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.72 51.0 4.69e-01 74.3% 100.0%
1ynjD04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.71 64.0 5.62e-01 98.0% 96.6%
1y5lA02 3.40.50.12440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 64.0 3.57e-01 99.0% 14.0%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.70 55.0 5.31e-01 83.2% 100.0%
1twfA03 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.70 60.0 6.02e-01 92.1% 93.1%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.69 56.0 5.55e-01 88.1% 83.0%
3sumB00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.69 58.0 5.19e-01 90.1% 94.9%
1q16A13 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 62.0 5.40e-01 99.0% 93.3%
1ti2A04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 56.0 4.84e-01 88.1% 91.6%
2e7zA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 56.0 4.81e-01 89.1% 84.5%
8e9gG01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.68 50.0 5.09e-01 78.2% 100.0%
1g8kA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 56.0 5.09e-01 90.1% 88.1%
2vpzA05 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 56.0 4.84e-01 91.1% 83.6%
1ogyA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 55.0 5.16e-01 89.1% 96.7%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.67 59.0 5.84e-01 97.0% 100.0%
1dmrA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 56.0 4.76e-01 91.1% 84.7%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.66 57.0 5.66e-01 92.1% 100.0%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.66 53.0 5.38e-01 85.1% 100.0%
2ki8A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.64 54.0 5.03e-01 92.1% 89.6%
2d9rA00 2.40.30.100 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like 0.63 49.0 5.29e-01 89.1% 100.0%
1h0hA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.61 53.0 4.48e-01 97.0% 90.9%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.61 48.0 4.96e-01 85.1% 100.0%
2zeqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 41.0 4.52e-01 96.0% 89.7%
1miqA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.59 42.0 3.69e-01 74.3% 78.9%
2pvpA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.56 35.0 4.20e-01 91.1% 100.0%
4psrA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 44.0 4.19e-01 93.1% 72.1%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 46.0 4.54e-01 96.0% 100.0%
3onhA01 3.10.290.20 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 0.53 37.0 3.68e-01 94.1% 68.5%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.51 39.0 3.86e-01 88.1% 76.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4963807 1.1.2.46 beta barrels › cradle loop barrel › RIFT-related › double psi › DUF5802 0.88 84.0 8.27e-01 99.0% 99.0%
4027677 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.83 65.0 7.00e-01 81.2% 100.0%
5048468 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.81 58.0 6.66e-01 87.1% 100.0%
4990349 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.81 61.0 6.81e-01 80.2% 100.0%
3430527 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.80 61.0 6.82e-01 84.2% 100.0%
4945245 1.1.2.44 beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N 0.80 61.0 6.78e-01 83.2% 100.0%
5011232 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.80 60.0 6.69e-01 81.2% 100.0%
5045002 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 62.0 6.53e-01 84.2% 92.2%
3706161 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.79 63.0 6.79e-01 92.1% 100.0%
33 1.1.2.15 beta barrels › cradle loop barrel › RIFT-related › double psi › PEX-2N 0.78 62.0 6.68e-01 85.1% 100.0%
5037727 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 62.0 6.73e-01 87.1% 100.0%
3492328 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.78 59.0 6.58e-01 79.2% 100.0%
3784921 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.78 61.0 6.63e-01 88.1% 98.8%
5073963 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 61.0 6.62e-01 88.1% 98.8%
4488210 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.77 61.0 6.63e-01 90.1% 100.0%
3824979 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 64.0 6.81e-01 94.1% 100.0%
3486347 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 65.0 6.73e-01 93.1% 95.8%
3514644 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.77 65.0 6.81e-01 94.1% 100.0%
4241168 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 58.0 6.38e-01 78.2% 100.0%
3744692 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 58.0 6.45e-01 97.0% 100.0%
4970875 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 61.0 6.63e-01 96.0% 100.0%
3707799 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 61.0 6.64e-01 95.0% 100.0%
3409396 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.76 63.0 6.24e-01 97.0% 83.8%
5043151 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 58.0 6.41e-01 80.2% 100.0%
4977163 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 62.0 6.60e-01 97.0% 100.0%
4986590 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 60.0 6.52e-01 87.1% 100.0%
4346976 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 60.0 6.47e-01 88.1% 100.0%
4171290 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.75 60.0 6.50e-01 87.1% 100.0%
4097451 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.75 58.0 6.24e-01 81.2% 100.0%
4108919 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 60.0 6.48e-01 87.1% 100.0%
4977837 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 59.0 6.42e-01 87.1% 100.0%
3599535 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.75 63.0 6.62e-01 92.1% 100.0%
5074983 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 62.0 6.52e-01 95.0% 100.0%
5001485 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.74 59.0 6.37e-01 87.1% 100.0%
5060748 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 62.0 6.08e-01 90.1% 89.1%
5060583 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.74 59.0 6.33e-01 93.1% 100.0%
4024752 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 61.0 6.16e-01 97.0% 89.0%
3597196 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 63.0 6.46e-01 91.1% 100.0%
3385821 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 53.0 5.84e-01 85.1% 95.0%
4961166 1.1.2.23 beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat 0.73 64.0 4.76e-01 95.0% 64.5%
4890564 101.1.2.869 alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.73 56.0 6.10e-01 86.1% 100.0%
4446061 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 55.0 6.10e-01 84.2% 100.0%
5053172 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 58.0 6.22e-01 86.1% 100.0%
3611762 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.73 61.0 6.28e-01 94.1% 94.7%
1883479 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.73 60.0 6.28e-01 88.1% 100.0%
3273202 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 64.0 6.48e-01 95.0% 100.0%
5053174 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 59.0 6.24e-01 97.0% 97.8%
4938597 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.72 61.0 5.76e-01 90.1% 94.2%
31 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.72 60.0 6.29e-01 90.1% 100.0%
5051053 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.72 60.0 5.56e-01 88.1% 89.5%
4995354 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 57.0 6.14e-01 83.2% 100.0%
3186315 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 61.0 6.20e-01 92.1% 100.0%
5052052 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.72 60.0 6.16e-01 92.1% 94.7%
3684407 1.1.2.35 beta barrels › cradle loop barrel › RIFT-related › double psi › PF26429 0.72 66.0 5.52e-01 100.0% 100.0%
3195760 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.72 59.0 6.23e-01 95.0% 98.9%
3477728 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.71 63.0 6.46e-01 96.0% 100.0%
4970500 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 60.0 5.57e-01 90.1% 92.0%
3977485 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 57.0 4.86e-01 85.1% 91.3%
5006288 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 59.0 5.84e-01 88.1% 92.4%
5072559 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 59.0 5.39e-01 88.1% 86.9%
4950319 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 59.0 5.39e-01 88.1% 86.0%
4954178 1.1.2.23 beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat 0.71 62.0 4.01e-01 97.0% 38.5%
4961498 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.71 56.0 4.91e-01 84.2% 95.3%
4973225 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 53.0 4.83e-01 79.2% 93.3%
3828556 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.71 59.0 5.29e-01 90.1% 99.3%
5056546 3349.1.1.3 a+b two layers › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › PolC_DP2_cat 0.70 61.0 3.95e-01 97.0% 37.7%
3557903 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.70 61.0 6.31e-01 98.0% 100.0%
4978464 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 58.0 5.53e-01 88.1% 93.9%
4979744 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 59.0 5.43e-01 91.1% 89.2%
5008389 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 59.0 4.74e-01 90.1% 83.6%
4863286 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.70 56.0 5.96e-01 95.0% 100.0%
4498374 1.1.2.23 beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_cat 0.70 61.0 4.58e-01 97.0% 67.6%
4987443 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.70 56.0 5.00e-01 85.1% 94.2%
3287818 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 59.0 5.06e-01 91.1% 87.7%
5019509 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 58.0 5.41e-01 90.1% 90.4%
3963359 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.69 52.0 5.25e-01 78.2% 97.0%
3789369 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 60.0 6.04e-01 94.1% 100.0%
3277741 1.1.2.9 beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.69 61.0 5.83e-01 96.0% 93.0%
5074694 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 58.0 5.14e-01 90.1% 96.4%
3406944 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 59.0 5.29e-01 93.1% 95.7%
4102554 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 54.0 5.37e-01 84.2% 99.0%
5077330 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 59.0 5.90e-01 93.1% 99.0%
4975555 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 61.0 5.72e-01 96.0% 95.8%
3175987 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 60.0 4.65e-01 95.0% 54.3%
2593735 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 54.0 4.91e-01 85.1% 100.0%
4961752 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.68 57.0 4.90e-01 91.1% 80.4%
4014411 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 57.0 5.87e-01 91.1% 100.0%
3946287 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.66 60.0 5.26e-01 100.0% 85.3%
5083293 1.1.2.13 beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.66 54.0 5.38e-01 87.1% 94.3%
3968980 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.66 60.0 4.79e-01 100.0% 88.2%
4936180 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 58.0 5.55e-01 98.0% 92.4%
4939451 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 50.0 5.39e-01 82.2% 100.0%
4995426 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 58.0 5.70e-01 99.0% 91.8%
4998900 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 56.0 5.66e-01 94.1% 98.0%
5000887 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 58.0 5.37e-01 100.0% 96.9%
1153507 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.64 49.0 5.09e-01 80.2% 95.7%
4369966 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.64 56.0 4.90e-01 97.0% 91.3%
2439653 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.63 56.0 4.95e-01 97.0% 97.3%
21 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.63 57.0 5.24e-01 100.0% 82.7%
2619898 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 55.0 4.90e-01 98.0% 82.6%