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IMGVR_UViG_2554235475_000003-2554235475-2556090051
Arc-VirIMGVR_UViG_2554235475_000003-2554235475-2556090051
Identity
- Kingdom:
- archaea
Quality
90.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-55
Domain cluster:
rep: S20_GE20_scaffold_13766_prodigal-single.1__X__X__00135__D6-54
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18780.7 best | HNH_repeat | 51.8 | 1.20e-13 | 100.0% | 88.9% |
D2
high
residues 68-116
Domain cluster:
rep: S20_GE20_scaffold_13766_prodigal-single.1__X__X__00135__D6-54
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18780.7 best | HNH_repeat | 73.7 | 1.70e-20 | 100.0% | 88.9% |
D3
high
residues 131-181
Domain cluster:
rep: S20_GE20_scaffold_13766_prodigal-single.1__X__X__00135__D6-54
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18780.7 best | HNH_repeat | 69.7 | 3.10e-19 | 96.1% | 90.7% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 60.0 | 4.11e-01 | 100.0% | 49.7% |
| 3c2bA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 57.0 | 5.75e-01 | 94.1% | 94.2% |
| 4aciA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 60.0 | 4.21e-01 | 100.0% | 29.5% |
| 1ji8A02 | 1.10.10.370 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DsrC protein, C-terminal domain | 0.70 | 58.0 | 5.50e-01 | 100.0% | 82.8% |
| 3htaC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 59.0 | 4.07e-01 | 100.0% | 27.5% |
| 2pbxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 3.99e-01 | 100.0% | 26.4% |
| 3qkxB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 4.05e-01 | 100.0% | 58.0% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 4.03e-01 | 100.0% | 28.4% |
| 3npiB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 57.0 | 3.88e-01 | 100.0% | 24.8% |
| 2g3bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 56.0 | 3.95e-01 | 100.0% | 60.4% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 55.0 | 5.40e-01 | 96.1% | 86.2% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 56.0 | 3.87e-01 | 100.0% | 26.0% |
| 2y30B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 56.0 | 5.51e-01 | 100.0% | 89.7% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 56.0 | 3.84e-01 | 100.0% | 24.9% |
| 5d18A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 55.0 | 3.82e-01 | 100.0% | 47.5% |
| 2uxuB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 55.0 | 3.80e-01 | 100.0% | 24.9% |
| 3aqtA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 57.0 | 3.88e-01 | 100.0% | 26.7% |
| 2fbqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 54.0 | 3.72e-01 | 100.0% | 56.3% |
| 3dewA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 52.0 | 5.23e-01 | 96.1% | 96.2% |
| 2d6yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 53.0 | 3.79e-01 | 100.0% | 28.0% |
| 2guhB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 54.0 | 3.84e-01 | 100.0% | 58.4% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 53.0 | 3.71e-01 | 100.0% | 55.4% |
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 54.0 | 3.84e-01 | 100.0% | 60.7% |
| 6el2B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 47.0 | 4.78e-01 | 98.0% | 95.9% |
| 3osgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 47.0 | 4.55e-01 | 100.0% | 76.7% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.58 | 44.0 | 4.18e-01 | 86.3% | 69.8% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.57 | 41.0 | 3.09e-01 | 78.4% | 31.2% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 44.0 | 3.70e-01 | 100.0% | 49.1% |
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.55 | 40.0 | 3.21e-01 | 80.4% | 69.1% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 41.0 | 3.99e-01 | 92.2% | 91.9% |
| 1ku3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.78e-01 | 94.1% | 78.7% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081163 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 82.0 | 8.03e-01 | 100.0% | 94.5% |
| 3279079 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 61.0 | 5.32e-01 | 100.0% | 62.5% |
| 165241 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.30e-01 | 100.0% | 63.4% |
| 4974313 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 58.0 | 5.68e-01 | 100.0% | 85.5% |
| 3956658 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 62.0 | 5.64e-01 | 100.0% | 74.3% |
| 4262267 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 61.0 | 5.62e-01 | 100.0% | 74.3% |
| 3957856 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 61.0 | 5.71e-01 | 100.0% | 80.0% |
| 3958071 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 60.0 | 5.39e-01 | 100.0% | 69.3% |
| 3590342 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 59.0 | 5.45e-01 | 100.0% | 75.7% |
| 2842310 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 59.0 | 5.28e-01 | 100.0% | 66.7% |
| 3279640 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 60.0 | 5.38e-01 | 100.0% | 69.3% |
| 1034912 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 60.0 | 5.45e-01 | 100.0% | 70.8% |
| 3954425 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 59.0 | 5.03e-01 | 100.0% | 57.8% |
| 3959840 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 59.0 | 5.42e-01 | 100.0% | 72.9% |
| 1212365 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 5.53e-01 | 100.0% | 81.2% |
| 3289608 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 59.0 | 5.29e-01 | 100.0% | 69.3% |
| 2544 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 5.35e-01 | 100.0% | 72.9% |
| 3969490 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 58.0 | 5.36e-01 | 100.0% | 74.3% |
| 3958595 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.22e-01 | 100.0% | 70.7% |
| 3279034 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 5.09e-01 | 100.0% | 65.0% |
| 3953810 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.23e-01 | 100.0% | 69.3% |
| 140289 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 5.28e-01 | 100.0% | 74.3% |
| 339417 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 5.18e-01 | 100.0% | 70.3% |
| 4424455 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 5.54e-01 | 100.0% | 86.7% |
| 3960205 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.01e-01 | 100.0% | 65.0% |
| 3288092 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 4.77e-01 | 100.0% | 54.7% |
| 3283171 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.19e-01 | 100.0% | 74.3% |
| 1934751 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.12e-01 | 100.0% | 70.3% |
| 2524 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.18e-01 | 100.0% | 73.2% |
| 3283805 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.16e-01 | 100.0% | 72.9% |
| 2521 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 56.0 | 4.81e-01 | 100.0% | 58.0% |
| 4068173 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 55.0 | 5.01e-01 | 100.0% | 69.3% |
| 1692421 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 55.0 | 4.93e-01 | 100.0% | 65.8% |
| 4597803 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 56.0 | 5.26e-01 | 100.0% | 80.0% |
| 3974144 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 56.0 | 5.05e-01 | 100.0% | 69.3% |
| 4475404 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 55.0 | 5.14e-01 | 100.0% | 74.3% |
| 4340989 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 54.0 | 4.95e-01 | 100.0% | 66.7% |
| 3957236 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 58.0 | 4.64e-01 | 100.0% | 49.5% |
| 3960034 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 55.0 | 4.65e-01 | 100.0% | 54.7% |
| 1247851 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 57.0 | 5.03e-01 | 100.0% | 66.7% |
| 1695198 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 53.0 | 5.00e-01 | 100.0% | 72.5% |
| 1879843 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 55.0 | 4.59e-01 | 100.0% | 52.5% |
| 3280175 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 54.0 | 4.99e-01 | 100.0% | 71.4% |
| 4883280 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 55.0 | 5.00e-01 | 100.0% | 69.9% |
| 4057463 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 55.0 | 4.78e-01 | 100.0% | 61.2% |
| 2537 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 53.0 | 5.02e-01 | 100.0% | 76.5% |
| 3106098 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 55.0 | 4.97e-01 | 100.0% | 70.3% |
| 4996942 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 54.0 | 4.73e-01 | 100.0% | 61.2% |
| 3278819 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 56.0 | 4.82e-01 | 100.0% | 60.0% |
| 4977986 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 54.0 | 5.09e-01 | 100.0% | 80.0% |
| 3950019 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 54.0 | 4.84e-01 | 100.0% | 65.0% |
| 4187216 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.65 | 54.0 | 4.92e-01 | 100.0% | 69.3% |
| 3281341 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.65 | 53.0 | 4.74e-01 | 100.0% | 68.8% |
| 4391471 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.64 | 48.0 | 4.71e-01 | 86.3% | 76.4% |
| 3223612 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.64 | 53.0 | 4.91e-01 | 100.0% | 78.6% |
| 3952000 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 54.0 | 4.78e-01 | 100.0% | 65.0% |
| 3974734 | 101.1.1.469 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_IclR | 0.64 | 47.0 | 4.89e-01 | 90.2% | 97.8% |
| 3283567 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 53.0 | 4.78e-01 | 100.0% | 69.3% |
| 4929780 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.64 | 52.0 | 4.68e-01 | 100.0% | 65.0% |
| 4076621 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.63 | 48.0 | 4.84e-01 | 94.1% | 86.0% |
| 5033577 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.61 | 46.0 | 4.62e-01 | 100.0% | 88.0% |
| 3640777 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 47.0 | 4.43e-01 | 100.0% | 73.8% |
| 3615581 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.58 | 46.0 | 4.67e-01 | 100.0% | 96.0% |
| 3727401 | 101.1.1.216 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_8 | 0.57 | 45.0 | 4.51e-01 | 100.0% | 89.1% |
| 1761264 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 46.0 | 4.60e-01 | 100.0% | 100.0% |
| 4932388 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.56 | 45.0 | 4.16e-01 | 100.0% | 72.0% |
| 3716640 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.55 | 41.0 | 2.90e-01 | 100.0% | 23.2% |
| 5039847 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.55 | 43.0 | 4.28e-01 | 100.0% | 87.3% |
| 3695966 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.54 | 41.0 | 2.84e-01 | 100.0% | 22.4% |