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IMGVR_UViG_2554235476_000006-2554235476-2556093183

Arc-Vir

IMGVR_UViG_2554235476_000006-2554235476-2556093183

Identity

Kingdom:
archaea

Quality

60.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 431-514
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 43.0 4.31e-01 81.0% 67.1%
1xqbA01 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.62 53.0 4.90e-01 96.4% 86.2%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.62 45.0 3.83e-01 77.4% 71.0%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 52.0 4.85e-01 96.4% 75.5%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.61 49.0 4.98e-01 97.6% 93.8%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 52.0 4.98e-01 100.0% 87.1%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.60 46.0 3.60e-01 100.0% 37.6%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.60 52.0 4.88e-01 98.8% 100.0%
1sefA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 39.0 3.49e-01 98.8% 47.1%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.59 50.0 4.37e-01 97.6% 72.7%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.58 50.0 5.09e-01 98.8% 100.0%
2f1lA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.58 51.0 5.01e-01 100.0% 95.5%
1vajA02 3.30.1490.150 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Hypothetical protein ph0010; domain 2 0.57 45.0 4.77e-01 97.6% 98.6%
2cspA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 4.72e-01 97.6% 82.7%
1ffvC03 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 50.0 4.56e-01 98.8% 89.5%
3cp3A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 3.95e-01 86.9% 72.4%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 3.73e-01 100.0% 44.1%
1o4tA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 36.0 3.29e-01 98.8% 47.0%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 46.0 4.47e-01 89.3% 85.9%
2w3sA04 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 50.0 4.56e-01 100.0% 88.6%
1loxA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 44.0 4.05e-01 85.7% 92.8%
4zohB02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 50.0 4.56e-01 98.8% 89.0%
1t3qC02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 50.0 4.46e-01 100.0% 87.3%
6v55A01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.56 42.0 3.90e-01 100.0% 61.6%
2e1qC04 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 50.0 4.31e-01 100.0% 86.9%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 46.0 3.77e-01 100.0% 49.1%
1m4kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.48e-01 100.0% 80.6%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 3.95e-01 98.8% 64.0%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 4.55e-01 96.4% 98.9%
5e4eC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.30e-01 100.0% 77.2%
1bpvA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 4.31e-01 100.0% 76.9%
3qfgA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 46.0 3.98e-01 100.0% 83.4%
3wndA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 42.0 4.11e-01 86.9% 87.2%
3dohA01 2.60.40.2180 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.98e-01 100.0% 83.0%
2yuwA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.31e-01 100.0% 81.6%
4ye4L01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.13e-01 97.6% 86.7%
2eo0B00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 47.0 4.14e-01 98.8% 70.2%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.53 40.0 3.77e-01 96.4% 66.3%
1z5hA03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 4.17e-01 97.6% 91.8%
1i5pA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 46.0 3.82e-01 100.0% 53.2%
1mkfA01 2.60.40.1330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 46.0 3.52e-01 100.0% 44.7%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.52 39.0 4.02e-01 91.7% 88.3%
1m1cA00 3.90.1840.10 Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein 0.51 39.0 2.36e-01 100.0% 10.8%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 4.14e-01 100.0% 85.3%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.60e-01 100.0% 52.4%
3lb6D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 4.14e-01 100.0% 85.9%
4kx7A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 4.22e-01 97.6% 92.9%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.51 42.0 4.02e-01 95.2% 100.0%
1iw4A00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.50 32.0 3.63e-01 96.4% 94.5%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 41.0 3.50e-01 89.3% 74.6%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4421198 5.2.1.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C 0.65 57.0 4.25e-01 96.4% 54.6%
3588940 10.32.1.260 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YfhO 0.63 50.0 4.02e-01 98.8% 43.6%
4946634 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 54.0 5.38e-01 98.8% 92.2%
3275414 11.1.1.802 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.62 48.0 4.79e-01 97.6% 82.4%
3591951 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 46.0 3.94e-01 88.1% 50.0%
3225114 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 54.0 4.45e-01 96.4% 61.3%
4952899 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 51.0 5.19e-01 100.0% 96.2%
3313040 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.62 49.0 3.77e-01 96.4% 37.0%
4542561 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.61 53.0 4.85e-01 96.4% 82.7%
4957573 11.41.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain 0.61 46.0 4.86e-01 98.8% 92.0%
3391397 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.61 54.0 5.28e-01 100.0% 97.8%
5033093 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 53.0 4.84e-01 100.0% 96.5%
5059336 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 50.0 4.91e-01 100.0% 85.6%
3230804 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 4.67e-01 100.0% 80.0%
5041180 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 48.0 4.18e-01 100.0% 56.2%
3255719 11.1.1.698 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 0.60 48.0 4.73e-01 100.0% 83.3%
4950007 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.59 53.0 4.44e-01 100.0% 74.3%
4553723 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 51.0 4.97e-01 100.0% 88.4%
4098005 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 51.0 5.00e-01 98.8% 95.6%
4391995 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 50.0 5.06e-01 97.6% 96.5%
3261759 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 4.82e-01 95.2% 90.6%
4577794 221.1.4.3 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › SLBB_2 0.58 47.0 4.54e-01 98.8% 76.8%
4163756 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.58 51.0 4.92e-01 100.0% 87.4%
5010198 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.58 42.0 3.76e-01 95.2% 52.0%
1385851 5092.1.1.3 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Reo_sigmaC 0.58 49.0 4.32e-01 97.6% 71.6%
3264187 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 47.0 4.53e-01 97.6% 78.9%
3864111 12.5.1.1 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 0.58 49.0 4.24e-01 98.8% 58.6%
5010111 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.58 43.0 3.90e-01 100.0% 56.0%
5076492 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.57 51.0 3.95e-01 100.0% 55.7%
7151 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.57 51.0 4.00e-01 100.0% 58.2%
3861513 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.57 47.0 4.58e-01 100.0% 85.3%
3517881 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.57 43.0 3.70e-01 90.5% 50.0%
3948061 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.57 39.0 4.43e-01 97.6% 100.0%
3228907 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 49.0 4.48e-01 100.0% 81.7%
3402635 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 49.0 4.25e-01 100.0% 78.5%
3854448 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.56 46.0 3.52e-01 100.0% 38.0%
5020572 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.71e-01 100.0% 92.2%
5029520 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.56 48.0 4.11e-01 98.8% 58.6%
4944194 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.56 50.0 3.91e-01 100.0% 56.7%
4484810 11.1.1.129 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.56 49.0 4.25e-01 100.0% 63.0%
3640344 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.56 50.0 3.59e-01 100.0% 45.3%
3572437 12.5.1.1 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5 0.56 48.0 4.03e-01 100.0% 56.8%
3970971 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.56 50.0 3.89e-01 100.0% 56.1%
4997066 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.68e-01 100.0% 90.5%
4982667 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.56 50.0 3.96e-01 100.0% 60.6%
4983769 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.56 50.0 3.89e-01 100.0% 57.2%
5021515 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.42e-01 100.0% 80.0%
5059044 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.66e-01 100.0% 87.4%
3513063 1.1.8.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C 0.55 43.0 3.66e-01 86.9% 86.7%
3562774 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.55 47.0 3.98e-01 100.0% 56.8%
3257463 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.50e-01 100.0% 85.3%
3791992 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 44.0 4.41e-01 86.9% 84.7%
3605671 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 45.0 3.89e-01 91.7% 59.3%
1005556 10.2.1.65 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › VP17_central_barrel 0.54 45.0 4.51e-01 96.4% 97.7%
3290403 217.1.1.1 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 0.54 48.0 3.69e-01 100.0% 64.6%
5043717 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 4.50e-01 100.0% 88.4%
3171970 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 41.0 4.09e-01 84.5% 86.7%
3243382 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 43.0 3.51e-01 100.0% 43.3%
3176549 4178.1.1.1 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.53 42.0 3.62e-01 91.7% 59.1%
4950356 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.53 45.0 3.88e-01 100.0% 60.0%
3274850 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 4.37e-01 97.6% 87.4%
3920856 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.52 42.0 3.61e-01 92.9% 53.1%
5012853 11.1.1.869 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26283 0.52 47.0 4.29e-01 100.0% 85.5%
3256305 11.1.1.897 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_DEX1 0.52 41.0 3.79e-01 85.7% 67.3%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.52 37.0 4.03e-01 78.6% 96.9%
2048187 12.1.1.28 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_106 0.52 38.0 3.86e-01 95.2% 80.2%
3387119 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.51 37.0 3.69e-01 78.6% 77.8%
5037075 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.51 43.0 4.36e-01 98.8% 100.0%
3265145 11.1.1.793 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.51 42.0 3.94e-01 100.0% 72.7%
3599776 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 43.0 3.89e-01 100.0% 69.5%
3893985 11.1.1.850 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28354 0.50 39.0 3.63e-01 100.0% 64.3%
3277081 11.1.1.1315 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034, DUF7743 0.50 44.0 3.00e-01 100.0% 29.1%
5058907 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 43.0 3.96e-01 98.8% 79.1%
4632883 217.1.1.2 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 0.50 43.0 3.39e-01 98.8% 50.0%
D2 medium residues 139-275
PDB
D3 medium residues 346-426
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 4.96e-01 96.3% 74.7%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.68 40.0 4.60e-01 79.0% 81.4%
2oap101 3.30.450.380 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.68 37.0 2.69e-01 74.1% 19.8%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 47.0 4.46e-01 96.3% 67.0%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 30.0 3.91e-01 81.5% 94.7%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.33e-01 81.5% 84.1%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.60 44.0 4.08e-01 100.0% 61.5%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.30e-01 93.8% 84.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.23e-01 87.7% 81.2%
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.59 37.0 3.33e-01 85.2% 44.7%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 38.0 4.16e-01 97.5% 83.1%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 45.0 4.85e-01 95.1% 100.0%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.58 39.0 4.54e-01 81.5% 100.0%
3mcaB01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 41.0 3.94e-01 100.0% 64.6%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 42.0 4.50e-01 86.4% 95.5%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 4.04e-01 87.7% 87.3%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.56 34.0 4.17e-01 86.4% 98.0%
1dlcA03 2.100.10.10 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain 0.56 45.0 3.39e-01 87.7% 80.7%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.72e-01 74.1% 89.7%
1rypD00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 45.0 3.24e-01 90.1% 51.9%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.67e-01 76.5% 80.0%
1rypC00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 46.0 3.32e-01 95.1% 85.2%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.54 40.0 3.26e-01 79.0% 98.7%
1g6zA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 36.0 3.85e-01 75.3% 80.0%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 35.0 3.18e-01 82.7% 48.2%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.54 43.0 3.65e-01 88.9% 60.3%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.53 44.0 3.87e-01 100.0% 58.3%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 33.0 3.69e-01 77.8% 82.0%
1sezA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 3.31e-01 87.7% 56.1%
5f7uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.44e-01 75.3% 96.4%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 4.22e-01 87.7% 90.4%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.53 31.0 3.89e-01 76.5% 100.0%
3l5iA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.60e-01 74.1% 87.5%
2zplB00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 43.0 4.17e-01 93.8% 98.9%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.50 38.0 3.61e-01 82.7% 98.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5055415 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.73 39.0 2.38e-01 74.1% 9.0%
3813787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 4.82e-01 92.6% 98.2%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 44.0 4.84e-01 100.0% 90.8%
4201878 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 43.0 4.67e-01 100.0% 89.2%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 43.0 4.64e-01 98.8% 89.2%
4942589 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 43.0 4.55e-01 95.1% 84.3%
4863266 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 39.0 4.27e-01 91.4% 80.0%
4158157 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 41.0 4.48e-01 96.3% 86.2%
3740379 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 41.0 4.66e-01 80.2% 93.3%
4965852 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.61 34.0 3.45e-01 74.1% 53.8%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 41.0 4.46e-01 96.3% 86.2%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 41.0 4.46e-01 97.5% 86.2%
3167531 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 48.0 4.11e-01 98.8% 51.9%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 41.0 4.44e-01 96.3% 86.2%
4028885 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 41.0 4.50e-01 97.5% 89.2%
608 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.60 44.0 4.08e-01 100.0% 61.5%
142633 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 40.0 4.30e-01 93.8% 84.8%
4981041 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.58 36.0 4.26e-01 76.5% 98.0%
4073200 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 40.0 4.31e-01 96.3% 89.2%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.58 40.0 4.30e-01 97.5% 84.3%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 40.0 4.29e-01 97.5% 89.2%
3171604 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 46.0 4.78e-01 90.1% 94.7%
4946993 4.1.1.479 ↗ beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.58 40.0 4.23e-01 97.5% 84.3%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.57 39.0 3.97e-01 95.1% 71.2%
5010892 2.1.1.17 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.57 34.0 3.15e-01 76.5% 46.7%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.57 42.0 4.32e-01 98.8% 85.3%
3579989 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.56 43.0 2.75e-01 80.2% 43.6%
3483489 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 37.0 3.84e-01 87.7% 74.7%
3770806 220.1.1.119 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.54 43.0 3.80e-01 86.4% 61.0%
3253266 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 3.95e-01 98.8% 67.6%
4978604 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 40.0 3.17e-01 77.8% 96.8%
5036230 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 38.0 3.91e-01 76.5% 85.0%
None — 0.52 43.0 2.99e-01 90.1% 90.4%
3784770 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.52 41.0 4.26e-01 97.5% 96.0%
3193145 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.51 40.0 2.60e-01 86.4% 49.5%
4938517 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 43.0 2.88e-01 90.1% 61.3%
5083247 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 3.43e-01 77.8% 97.1%
3212893 5.1.3.57 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 0.51 43.0 2.77e-01 91.4% 75.6%
3667278 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.50 40.0 3.46e-01 87.7% 73.1%
3301326 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.50 43.0 3.34e-01 100.0% 41.0%