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IMGVR_UViG_2554235476_000008-2554235476-2556095468

Arc-Vir

IMGVR_UViG_2554235476_000008-2554235476-2556095468

Identity

Kingdom:
archaea

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-47
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 6.04e-01 100.0% 73.1%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.98e-01 100.0% 76.6%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 6.35e-01 97.7% 92.3%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.27e-01 97.7% 84.6%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 4.58e-01 100.0% 36.6%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.18e-01 100.0% 59.5%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.47e-01 100.0% 77.3%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 6.20e-01 100.0% 96.0%
6e6qA00 1.10.10.1100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BFD-like [2Fe-2S]-binding domain 0.74 62.0 5.85e-01 100.0% 94.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.70e-01 93.2% 94.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.81e-01 100.0% 92.6%
1txuA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.70 58.0 4.70e-01 100.0% 69.1%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.70 48.0 3.94e-01 77.3% 39.5%
1t3qA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.69 56.0 4.79e-01 100.0% 58.0%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.13e-01 100.0% 71.0%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.73e-01 100.0% 72.3%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.61e-01 100.0% 94.2%
1bbyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.94e-01 100.0% 84.1%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 5.32e-01 100.0% 86.8%
1g4wR02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.67 53.0 3.54e-01 100.0% 22.6%
1o4xA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 5.16e-01 100.0% 85.2%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 52.0 5.23e-01 100.0% 97.9%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.70e-01 100.0% 85.5%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 48.0 4.03e-01 97.7% 45.9%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 50.0 4.99e-01 100.0% 89.6%
3e74A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.63 52.0 3.15e-01 100.0% 12.8%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.62 50.0 4.76e-01 97.7% 89.3%
3qnmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 45.0 3.71e-01 84.1% 62.2%
1ornA02 1.10.1670.10 Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.60 51.0 3.97e-01 97.7% 61.0%
3azoA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 47.0 2.88e-01 88.6% 16.6%
3cnhB02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 42.0 3.86e-01 93.2% 73.5%
4a6dA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 39.0 2.61e-01 100.0% 16.3%
2zxyA00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.52 39.0 3.48e-01 100.0% 87.2%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5084007 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 76.0 6.32e-01 100.0% 73.3%
3282811 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.83 60.0 6.28e-01 88.6% 85.0%
4277992 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 65.0 5.49e-01 100.0% 52.0%
4013216 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 71.0 6.43e-01 100.0% 80.0%
3879117 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 72.0 6.64e-01 100.0% 90.9%
3576763 101.1.1.332 alpha arrays › HTH › HTH › Three-helical HTH › Nucleolin_bd 0.80 68.0 5.97e-01 95.5% 81.5%
5073726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 69.0 5.56e-01 100.0% 56.5%
5083233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 5.75e-01 97.7% 68.6%
5062039 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.78 67.0 6.47e-01 100.0% 94.0%
3699588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 5.84e-01 100.0% 71.4%
3924290 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 67.0 6.69e-01 100.0% 100.0%
3987326 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.76 64.0 5.87e-01 100.0% 86.7%
4547756 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 66.0 5.70e-01 100.0% 70.0%
3954432 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 5.94e-01 100.0% 83.6%
4939825 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 5.20e-01 97.7% 58.7%
4947593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 6.04e-01 100.0% 89.1%
3509167 101.1.1.244 alpha arrays › HTH › HTH › Three-helical HTH › HTH_TIMELESS 0.74 63.0 6.15e-01 100.0% 96.0%
3971367 179.1.1.1 alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 0.74 61.0 5.13e-01 100.0% 59.0%
5074546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.19e-01 100.0% 56.5%
3508184 101.1.2.103 alpha arrays › HTH › HTH › winged helix domain › SelB-wing_2 0.74 62.0 5.34e-01 100.0% 77.3%
5024733 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 62.0 5.52e-01 97.7% 73.8%
4957813 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 63.0 5.61e-01 100.0% 72.3%
3200045 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 59.0 5.47e-01 95.5% 73.3%
3687311 101.32.1.1 alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD 0.73 61.0 5.34e-01 100.0% 74.3%
4946290 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.44e-01 100.0% 84.6%
4168631 101.1.6.20 alpha arrays › HTH › HTH › TrpR › PF28388 0.72 59.0 5.81e-01 100.0% 88.0%
3946981 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.72 62.0 5.82e-01 100.0% 89.1%
5029950 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.50e-01 97.7% 78.2%
3882191 101.1.2.639 alpha arrays › HTH › HTH › winged helix domain › PF28388 0.71 57.0 5.73e-01 95.5% 93.3%
3589215 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.71 58.0 5.50e-01 97.7% 85.5%
4627782 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 4.87e-01 100.0% 61.2%
5058496 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.70 61.0 5.27e-01 100.0% 70.0%
4841979 101.1.1.16 alpha arrays › HTH › HTH › Three-helical HTH › HTH_WhiA 0.70 57.0 4.90e-01 93.2% 57.5%
3964709 101.1.1.118 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 0.70 61.0 5.90e-01 100.0% 88.0%
3397887 101.1.1.28 alpha arrays › HTH › HTH › Three-helical HTH › SWIRM 0.70 56.0 5.03e-01 100.0% 65.7%
4025977 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.69 59.0 5.94e-01 100.0% 97.8%
3773003 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 58.0 4.78e-01 100.0% 77.6%
4173594 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.69 51.0 5.15e-01 100.0% 86.7%
3684804 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.68 54.0 5.15e-01 97.7% 74.5%
3773904 101.1.2.361 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-binding 0.68 56.0 5.18e-01 97.7% 71.7%
3450184 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.68 57.0 5.25e-01 100.0% 78.3%
3869694 101.1.2.361 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-binding 0.67 55.0 4.66e-01 97.7% 53.8%
3410940 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.67 54.0 5.18e-01 97.7% 78.2%
3505644 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.67 55.0 4.93e-01 97.7% 66.2%
3490405 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.67 55.0 5.05e-01 97.7% 71.7%
3947236 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.66 55.0 5.28e-01 100.0% 88.9%
3943860 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.66 53.0 5.09e-01 97.7% 85.5%
4071647 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.66 50.0 4.81e-01 100.0% 72.7%
3514901 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.66 52.0 4.63e-01 100.0% 68.0%
3929513 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.65 51.0 4.29e-01 97.7% 48.9%
4962283 604.4.1.0 alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP 0.62 49.0 4.28e-01 100.0% 86.3%
4028834 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.55 45.0 3.37e-01 100.0% 35.0%
D2 high residues 93-276
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2faoA01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.68 62.0 5.37e-01 99.5% 94.0%
1ywhA01 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.57 24.0 3.55e-01 83.2% 88.9%
3thtA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 29.0 3.88e-01 74.5% 95.7%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.56 30.0 3.80e-01 79.3% 87.2%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 28.0 3.82e-01 79.3% 100.0%
1x4dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 30.0 3.85e-01 81.0% 95.1%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 26.0 3.62e-01 78.8% 100.0%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 18.0 3.03e-01 71.2% 86.6%
1apsA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 28.0 3.59e-01 87.5% 95.9%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4962598 862.1.1.0 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.86 77.0 8.05e-01 98.4% 100.0%
3437198 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.63 31.0 3.82e-01 81.5% 71.7%
5081186 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.62 28.0 4.13e-01 79.3% 100.0%
5046686 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 29.0 4.15e-01 77.7% 100.0%
138899 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 27.0 3.91e-01 78.8% 93.8%
3935266 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.60 24.0 3.45e-01 84.8% 76.7%
3445332 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.60 30.0 4.01e-01 78.3% 90.5%
5035989 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 29.0 4.03e-01 77.7% 93.3%
4405956 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 28.0 3.85e-01 76.6% 88.9%
5066741 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.59 29.0 4.10e-01 79.9% 98.8%
4083949 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.59 29.0 4.12e-01 78.3% 100.0%
3684127 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 29.0 4.11e-01 79.3% 100.0%
3784165 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.59 29.0 4.07e-01 81.5% 96.7%
4940609 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.59 28.0 4.02e-01 78.8% 97.6%
357856 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.58 28.0 3.91e-01 77.2% 93.2%
3355370 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.58 29.0 3.84e-01 77.2% 87.0%
3742864 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 27.0 3.43e-01 77.2% 71.8%
5072282 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 28.0 3.81e-01 79.3% 92.2%
4996336 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 29.0 3.86e-01 88.6% 91.6%
5261 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.57 27.0 3.81e-01 77.2% 92.3%
1190547 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 27.0 3.67e-01 78.3% 88.9%
3647098 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.57 33.0 3.73e-01 84.8% 73.6%
3220969 382.1.1.6 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR 0.56 23.0 3.26e-01 83.7% 76.7%
4992138 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.56 29.0 3.98e-01 82.1% 100.0%
4011243 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 29.0 3.92e-01 74.5% 98.9%
3745974 304.9.1.40 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 0.56 36.0 4.13e-01 85.3% 89.2%
3175958 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 28.0 3.88e-01 81.0% 98.9%
3648905 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 31.0 3.59e-01 72.8% 76.2%
3215773 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 30.0 3.91e-01 82.1% 100.0%
3496261 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 33.0 3.97e-01 75.0% 93.0%
3899239 382.1.1.1 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.54 24.0 3.39e-01 84.8% 84.4%
4954913 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.53 29.0 3.82e-01 90.8% 100.0%
3796687 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 24.0 3.49e-01 78.8% 95.0%
3486001 304.117.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.53 24.0 3.49e-01 88.0% 100.0%
3520613 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 23.0 3.28e-01 85.3% 85.9%
3851268 382.1.1.1 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.53 24.0 3.22e-01 85.3% 80.0%
3742418 304.11.1.0 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.52 26.0 3.63e-01 88.0% 100.0%
3536318 304.9.1.36 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_10 0.52 30.0 3.80e-01 81.0% 97.1%
3804539 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 29.0 3.60e-01 72.8% 90.0%
5420 304.110.1.1 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › Acylphosphatase 0.51 28.0 3.59e-01 87.5% 95.9%
3791663 304.4.1.52 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7153 0.51 40.0 3.79e-01 83.7% 98.3%
4979725 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 26.0 3.42e-01 81.0% 95.6%
3243073 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.50 24.0 3.38e-01 80.4% 95.3%
3273114 304.9.1.23 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_5 0.50 34.0 3.97e-01 82.6% 100.0%
4011340 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.50 31.0 3.42e-01 86.4% 75.9%
D3 high residues 296-412
PDB
Domain cluster: representative
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4539347 375.1.1.15 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-CHC2 0.75 61.0 6.55e-01 96.6% 100.0%
3602639 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 50.0 5.21e-01 90.6% 99.1%
3657952 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.54 37.0 3.14e-01 70.1% 64.0%
3555736 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 30.0 2.82e-01 74.4% 42.7%
4666226 2007.2.3.27 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › IpgD 0.52 39.0 2.71e-01 77.8% 81.0%
3402417 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.51 41.0 3.38e-01 88.9% 71.1%
D4 high residues 650-714_729-786_824-851
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 25.0 3.41e-01 92.1% 71.8%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 28.0 3.39e-01 73.5% 69.7%
1yvwA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.56 32.0 4.01e-01 98.0% 91.3%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 33.0 3.53e-01 97.4% 66.9%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 28.0 3.27e-01 82.1% 67.0%
7t7kA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.53 33.0 3.68e-01 98.7% 78.8%
1x4oA00 1.10.10.790 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module 0.53 25.0 3.35e-01 74.8% 84.6%
6d5xA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.52 40.0 4.08e-01 80.1% 88.7%
3gzsA00 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 45.0 3.22e-01 96.7% 91.3%
1yisA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.52 27.0 3.16e-01 77.5% 70.9%
3k3dA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 33.0 3.56e-01 100.0% 76.2%
2fiyA00 3.90.1670.10 Alpha Beta › Alpha-Beta Complex › FdhE-like fold › FdhE-like domain 0.51 40.0 3.26e-01 82.8% 99.3%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945332 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.58 49.0 5.08e-01 98.7% 97.1%
4019714 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.58 40.0 4.42e-01 89.4% 87.5%
3419996 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.57 52.0 5.11e-01 100.0% 98.8%
4930933 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.56 51.0 5.02e-01 99.3% 98.1%
3733145 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 41.0 4.25e-01 90.1% 87.1%
4951175 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.51 39.0 3.55e-01 81.5% 83.8%
3423128 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.51 44.0 4.43e-01 94.7% 92.0%
3961237 4952.1.1.0 alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like 0.50 26.0 3.16e-01 75.5% 76.8%
D5 medium residues 434-492_632-646_852-901
PDB
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vl7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 61.0 5.47e-01 88.7% 100.0%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 60.0 5.61e-01 86.3% 100.0%
3v4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 62.0 4.85e-01 89.5% 95.9%
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 59.0 5.05e-01 85.5% 92.2%
7jgsD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 58.0 5.02e-01 84.7% 93.7%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 53.0 5.18e-01 76.6% 100.0%
3vkgA10 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 58.0 4.95e-01 87.1% 90.8%
1fnnA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 58.0 5.19e-01 87.9% 100.0%
3vkgA07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 56.0 3.88e-01 83.9% 42.9%
3te6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 58.0 4.99e-01 88.7% 90.6%
2z0mA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 57.0 4.90e-01 87.1% 92.7%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 58.0 4.96e-01 90.3% 87.5%
6qelJ01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 58.0 5.18e-01 91.1% 89.3%
4rh7A01 1.20.920.20 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.69 61.0 4.29e-01 96.8% 69.9%
1um8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 57.0 4.61e-01 87.9% 92.2%
6l5oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 55.0 4.67e-01 85.5% 94.1%
1r6bX04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 57.0 4.85e-01 88.7% 89.3%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 55.0 5.13e-01 85.5% 92.7%
4w7sA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 57.0 4.47e-01 91.9% 92.5%
7xexC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 55.0 4.73e-01 91.9% 86.1%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 54.0 4.51e-01 88.7% 91.4%
1c4oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 4.91e-01 85.5% 94.8%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 53.0 4.31e-01 87.9% 84.8%
3dnfB01 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.64 40.0 4.39e-01 90.3% 78.0%
1svmA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 53.0 4.94e-01 89.5% 100.0%
7pliF02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 51.0 4.79e-01 86.3% 82.8%
3brqB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 51.0 4.87e-01 87.1% 91.0%
6eudA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 4.79e-01 92.7% 68.2%
3dnfA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.62 47.0 5.13e-01 87.1% 100.0%
5c5cA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 49.0 4.46e-01 85.5% 70.1%
2xauA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 53.0 4.64e-01 94.4% 71.0%
4d4iA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.61 52.0 3.62e-01 93.5% 52.1%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 51.0 4.43e-01 91.9% 67.2%
1dbrC00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 53.0 4.44e-01 96.8% 88.8%
5gvrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 4.24e-01 94.4% 66.7%
2e4uA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 48.0 4.30e-01 85.5% 76.9%
3huuC02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 48.0 4.78e-01 87.1% 81.2%
5braA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 48.0 4.73e-01 86.3% 100.0%
4wzzA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 49.0 4.51e-01 87.9% 88.7%
3rotA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 47.0 4.62e-01 85.5% 100.0%
1m6nA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 51.0 4.64e-01 96.8% 83.3%
1gcaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 49.0 4.50e-01 89.5% 91.3%
3a1fA00 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.59 46.0 4.25e-01 83.9% 100.0%
2hyiC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 4.46e-01 91.1% 77.2%
2x7xA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 4.66e-01 89.5% 100.0%
2rjoA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 4.36e-01 90.3% 95.4%
3g1wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 47.0 4.45e-01 86.3% 91.1%
4ry8C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 4.37e-01 89.5% 82.5%
4kq9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 49.0 4.25e-01 93.5% 71.5%
4yleA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 4.56e-01 90.3% 93.8%
4eygA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 46.0 4.22e-01 86.3% 79.2%
5dteA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 4.52e-01 91.9% 90.2%
5bq3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 47.0 4.43e-01 90.3% 89.7%
3m9wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 45.0 4.22e-01 86.3% 84.6%
4n7bA01 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.57 43.0 4.50e-01 83.9% 86.2%
4rsmA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 46.0 4.40e-01 88.7% 89.3%
3brsA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 46.0 4.57e-01 88.7% 95.5%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 49.0 4.64e-01 94.4% 91.9%
4evqA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 45.0 4.20e-01 86.3% 70.3%
5q22A02 3.40.50.12650 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 49.0 4.62e-01 94.4% 100.0%
1qz9A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 49.0 3.90e-01 96.8% 59.4%
1hgxA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 48.0 4.45e-01 96.0% 97.0%
4ry9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 46.0 4.25e-01 89.5% 88.3%
7sglD01 3.40.50.12650 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 46.0 4.52e-01 90.3% 85.4%
1riiB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.56 46.0 3.74e-01 89.5% 94.9%
1amuA01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 42.0 3.94e-01 87.9% 62.4%
1y0bB01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 47.0 4.20e-01 94.4% 96.7%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 3.44e-01 96.0% 45.2%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 45.0 4.60e-01 89.5% 94.1%
1m0wA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.54 43.0 4.29e-01 86.3% 98.4%
3e1sA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 3.96e-01 91.1% 70.9%
2yxlA04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.80e-01 89.5% 95.6%
2ihtA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.54 45.0 3.85e-01 93.5% 86.0%
3uw2A01 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.54 42.0 3.97e-01 96.8% 67.7%
2f8lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 44.0 3.64e-01 91.9% 75.5%
3bt7A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 46.0 3.83e-01 96.0% 94.6%
4pawB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 46.0 4.00e-01 96.0% 98.5%
3imkA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 42.0 3.90e-01 83.9% 72.2%
7kl6A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 46.0 4.40e-01 95.2% 95.8%
3fkqA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 45.0 3.70e-01 94.4% 63.3%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 40.0 3.46e-01 81.5% 66.0%
5ahoA02 3.40.50.12650 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 4.55e-01 94.4% 100.0%
2b78A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 42.0 3.61e-01 88.7% 84.6%
3lkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.38e-01 91.9% 80.9%
2cb0A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 44.0 4.14e-01 94.4% 83.6%
3jb9X01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.65e-01 94.4% 56.3%
3e0vB01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.51 42.0 3.90e-01 89.5% 69.6%
4c7oA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 42.0 3.63e-01 90.3% 60.8%
2a3nA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.50 42.0 3.92e-01 93.5% 79.6%
1xr4A02 3.40.1080.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase 0.50 42.0 3.35e-01 93.5% 62.5%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5054851 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.78 65.0 4.88e-01 87.9% 95.8%
3647659 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 63.0 5.33e-01 86.3% 91.5%
None 0.76 62.0 4.19e-01 85.5% 98.3%
3977708 2004.1.1.485 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, DEAD_2 0.75 63.0 4.78e-01 89.5% 94.0%
5001300 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.75 65.0 4.86e-01 91.9% 96.2%
4405181 2004.1.1.1100 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C, ResIII, UvrB 0.75 64.0 4.50e-01 91.1% 98.4%
3450222 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.75 61.0 5.36e-01 85.5% 96.6%
5048316 2004.1.1.1221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27431 0.74 62.0 4.24e-01 88.7% 97.3%
None 0.74 62.0 4.02e-01 88.7% 77.7%
None 0.74 62.0 4.12e-01 88.7% 87.1%
None 0.74 62.0 4.19e-01 88.7% 95.4%
3931462 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 60.0 4.77e-01 87.1% 79.2%
3925711 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 62.0 5.14e-01 91.1% 83.3%
4887412 2004.1.1.489 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII, PF27431 0.73 63.0 4.53e-01 91.9% 96.7%
None 0.73 63.0 4.20e-01 91.9% 90.3%
4039355 2004.1.1.258 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.73 58.0 4.16e-01 84.7% 95.7%
None 0.72 60.0 4.93e-01 89.5% 84.0%
4974815 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 59.0 4.97e-01 85.5% 83.1%
3911415 2004.1.1.182 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_8 0.72 61.0 4.79e-01 90.3% 76.0%
2755226 2004.1.1.182 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_8 0.71 61.0 4.88e-01 91.1% 80.5%
4968899 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 60.0 5.37e-01 89.5% 92.9%
4033661 2004.1.1.263 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3388 0.71 61.0 5.87e-01 91.9% 96.4%
4946904 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 59.0 5.07e-01 89.5% 85.1%
3621730 2004.1.1.98 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 0.70 59.0 5.09e-01 88.7% 93.0%
3219769 2004.1.1.110 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ORC2 0.70 60.0 5.00e-01 91.9% 78.1%
3224330 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 57.0 5.53e-01 87.1% 100.0%
3802821 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.70 58.0 4.91e-01 87.9% 93.5%
5028604 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 58.0 5.38e-01 88.7% 92.9%
3839304 2004.1.1.153 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.70 57.0 4.70e-01 85.5% 89.5%
None 0.70 60.0 3.66e-01 91.9% 54.2%
3703764 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 57.0 4.86e-01 85.5% 82.1%
4030380 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 59.0 4.38e-01 91.9% 70.6%
3181352 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 58.0 4.60e-01 88.7% 81.6%
4999523 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 58.0 4.44e-01 89.5% 90.7%
3519426 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 56.0 5.17e-01 85.5% 100.0%
3597901 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.69 57.0 4.70e-01 87.9% 73.0%
3593609 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 59.0 4.49e-01 91.9% 65.7%
3938925 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 55.0 5.12e-01 85.5% 85.8%
4029366 2004.1.1.535 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Utp25_C, UTP25_NTPase-like 0.68 58.0 3.81e-01 92.7% 62.5%
3625938 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.68 58.0 5.02e-01 91.9% 83.7%
3271689 2004.1.1.98 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 0.67 58.0 4.09e-01 91.9% 51.1%
None 0.67 57.0 4.41e-01 91.9% 71.3%
4026391 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.67 57.0 4.98e-01 92.7% 73.0%
4329634 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 3.68e-01 98.4% 66.4%
4937193 2004.1.1.231 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNase_J_b_CASP 0.66 56.0 5.03e-01 89.5% 83.0%
5004278 2004.1.1.234 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_D3-like 0.65 55.0 4.40e-01 91.9% 78.8%
4606906 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.65 57.0 4.44e-01 96.0% 88.3%
4944804 2004.1.1.234 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_D3-like 0.64 55.0 4.57e-01 94.4% 80.9%
4143141 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.64 41.0 4.66e-01 87.1% 87.6%
4028442 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 56.0 4.88e-01 94.4% 93.5%
3468542 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.64 53.0 4.23e-01 91.1% 90.4%
None 0.64 57.0 3.62e-01 99.2% 61.7%
3461836 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.62 52.0 4.74e-01 91.1% 96.4%
3433919 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.62 51.0 4.98e-01 87.9% 92.6%
4208861 2004.1.1.224 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_SecA 0.61 52.0 4.22e-01 93.5% 85.7%
4064274 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 52.0 3.27e-01 92.7% 20.7%
3494883 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.61 50.0 4.19e-01 89.5% 85.0%
3950801 2004.1.1.505 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.61 55.0 4.17e-01 100.0% 82.7%
3833753 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 54.0 3.30e-01 99.2% 35.5%
None 0.60 52.0 3.34e-01 96.8% 40.5%
1593857 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.60 47.0 4.74e-01 85.5% 90.6%
4260480 2004.1.1.224 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_SecA 0.60 52.0 4.35e-01 96.8% 65.5%
3439867 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.60 50.0 4.35e-01 91.1% 97.9%
None 0.59 54.0 3.43e-01 100.0% 34.2%
3715963 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.59 49.0 4.29e-01 93.5% 86.5%
5025463 2003.1.5.50 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TylF 0.59 48.0 3.99e-01 90.3% 79.1%
3426410 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.58 49.0 4.29e-01 92.7% 73.2%
4578106 161.1.1.0 alpha complex topology › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.58 52.0 3.61e-01 99.2% 50.6%
3858596 2004.5.1.4 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENND11 0.58 46.0 3.83e-01 86.3% 48.8%
3283354 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.58 48.0 4.48e-01 91.1% 88.4%
4089253 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.57 40.0 4.58e-01 75.8% 100.0%
4938116 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 49.0 3.36e-01 93.5% 55.3%
1172988 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.57 47.0 4.61e-01 90.3% 100.0%
3960562 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.57 43.0 3.89e-01 87.1% 57.1%
4976934 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 49.0 4.23e-01 94.4% 74.4%
4026825 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.56 47.0 4.04e-01 90.3% 64.0%
3517438 7585.1.1.0 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins 0.56 47.0 4.46e-01 90.3% 93.8%
4946985 2004.1.1.43 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 0.56 43.0 3.56e-01 81.5% 64.0%
3411652 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.55 43.0 4.25e-01 82.3% 78.5%
3948324 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 44.0 4.23e-01 88.7% 73.8%
3441883 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 44.0 4.37e-01 89.5% 82.2%
3286902 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.55 42.0 3.95e-01 95.2% 65.8%
3787536 2007.6.1.1 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › Ribosomal_S2 0.53 44.0 3.61e-01 90.3% 86.0%
4932399 2004.1.1.43 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRP54 0.51 42.0 3.06e-01 91.1% 36.1%
D6 medium residues 992-1065
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5i4nA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 36.0 3.40e-01 73.0% 54.3%
5aj3P00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.53 30.0 2.60e-01 89.2% 32.5%
3gveA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.53 42.0 2.83e-01 91.9% 81.4%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 38.0 2.79e-01 83.8% 92.4%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041736 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 33.0 3.34e-01 73.0% 49.3%
3311607 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 35.0 3.08e-01 89.2% 39.1%
3942988 4187.2.1.1 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.53 32.0 3.37e-01 90.5% 66.2%
4084869 213.1.1.14 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_16 0.53 38.0 2.99e-01 77.0% 97.7%
3185466 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.53 38.0 2.89e-01 78.4% 98.0%
4020185 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.53 26.0 2.30e-01 94.6% 25.8%
3639274 261.1.1.1 a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT 0.53 39.0 2.36e-01 79.7% 14.4%
4137758 375.14.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.52 32.0 3.58e-01 91.9% 88.0%
4399128 7581.1.1.30 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, Thiolase_C 0.50 40.0 2.63e-01 89.2% 83.2%
4233683 171.1.1.1 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.50 41.0 3.04e-01 94.6% 69.5%
D7 medium residues 1132-1192
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 49.0 3.67e-01 96.7% 30.4%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 4.84e-01 98.4% 57.1%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.76e-01 96.7% 66.7%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 42.0 3.14e-01 96.7% 24.4%
4ociA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.68 50.0 4.93e-01 96.7% 72.7%
1uhwA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.28e-01 100.0% 80.7%
5jolA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 47.0 4.31e-01 96.7% 69.5%
3jtgA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.29e-01 98.4% 98.8%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.09e-01 96.7% 66.3%
3hruB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 2.87e-01 75.4% 56.8%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.72 53.0 3.08e-01 95.1% 9.6%
3422272 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.71 60.0 5.41e-01 96.7% 68.8%
3676617 108.1.1.114 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_6, EF-hand_7 0.71 52.0 3.67e-01 95.1% 26.1%
None 0.69 51.0 3.03e-01 96.7% 10.0%
3171688 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.69 55.0 3.89e-01 100.0% 29.4%
3781059 108.1.1.26 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.67 49.0 4.03e-01 98.4% 42.7%
None 0.67 50.0 2.93e-01 96.7% 9.5%
3948523 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 4.88e-01 100.0% 72.9%
3909658 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 50.0 3.96e-01 95.1% 40.0%
3827376 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.64 55.0 4.33e-01 93.4% 64.0%
4088893 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 51.0 3.83e-01 95.1% 41.1%
3259486 101.1.2.12 alpha arrays › HTH › HTH › winged helix domain › DEP 0.63 54.0 4.75e-01 98.4% 64.4%
4026275 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 47.0 4.65e-01 93.4% 75.4%
3714011 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 46.0 4.38e-01 95.1% 65.3%
3659397 108.1.1.107 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7, EF-hand_8 0.62 50.0 4.41e-01 91.8% 60.0%
3491974 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.61 50.0 4.80e-01 91.8% 77.1%
3445048 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.61 51.0 4.76e-01 91.8% 73.3%
4663141 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 52.0 4.28e-01 100.0% 92.5%
3484509 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 44.0 3.64e-01 82.0% 45.6%
3551200 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.61 50.0 4.66e-01 91.8% 73.3%
3345058 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.60 50.0 4.57e-01 93.4% 68.8%
3819659 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.60 49.0 4.62e-01 91.8% 73.3%
3596885 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 53.0 4.23e-01 96.7% 60.0%
3608310 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.60 45.0 4.19e-01 96.7% 63.7%
3699302 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.60 48.0 4.71e-01 96.7% 83.1%
3883984 108.1.1.167 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_10 0.59 49.0 4.67e-01 93.4% 78.6%
3598178 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 48.0 4.31e-01 91.8% 64.7%
3744518 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 50.0 4.08e-01 98.4% 62.5%
3865839 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 44.0 3.75e-01 95.1% 50.0%
1762928 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.58 48.0 4.61e-01 91.8% 79.7%
3846614 109.4.1.162 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.58 43.0 2.31e-01 83.6% 7.3%
3472384 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.58 48.0 4.63e-01 91.8% 84.3%
3546144 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.58 43.0 4.50e-01 82.0% 92.7%
3531025 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.58 47.0 3.93e-01 91.8% 52.4%
3488460 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.57 45.0 4.25e-01 96.7% 70.7%
3846876 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.56 45.0 4.23e-01 91.8% 73.3%
3248302 7579.1.1.44 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 0.53 42.0 2.94e-01 90.2% 60.5%
3183184 109.4.1.162 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.53 44.0 2.37e-01 100.0% 9.0%
3271233 109.4.1.791 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 0.51 38.0 2.39e-01 82.0% 22.9%
3633346 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 41.0 3.72e-01 93.4% 65.6%