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IMGVR_UViG_2554235478_000002-2554235478-2556103455

Arc-Vir

IMGVR_UViG_2554235478_000002-2554235478-2556103455

Identity

Kingdom:
archaea

Quality

89.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-55
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.70 63.0 6.00e-01 100.0% 96.6%
1plsA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 54.0 4.26e-01 93.9% 63.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 53.0 4.86e-01 89.8% 71.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 5.26e-01 100.0% 85.5%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 51.0 4.68e-01 89.8% 71.6%
1ckmA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.64 50.0 3.57e-01 87.8% 67.7%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 46.0 4.05e-01 87.8% 52.1%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 50.0 3.01e-01 89.8% 20.7%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.64 44.0 4.31e-01 83.7% 67.9%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 49.0 3.88e-01 87.8% 57.5%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 49.0 4.52e-01 89.8% 73.1%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 4.15e-01 100.0% 97.5%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 51.0 3.64e-01 93.9% 50.3%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.63 51.0 3.73e-01 93.9% 72.2%
2xrcC04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 49.0 3.46e-01 91.8% 38.8%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.59e-01 100.0% 70.1%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 51.0 3.58e-01 95.9% 42.9%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 4.42e-01 100.0% 70.9%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 54.0 4.50e-01 100.0% 80.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 48.0 4.65e-01 87.8% 83.9%
7lt2A01 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.61 44.0 2.83e-01 89.8% 15.5%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 50.0 4.67e-01 100.0% 92.4%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.60 37.0 2.60e-01 85.7% 19.1%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 48.0 4.22e-01 91.8% 62.3%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.57e-01 100.0% 74.3%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 48.0 4.12e-01 89.8% 64.1%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 50.0 3.94e-01 100.0% 96.5%
4i14A02 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.59 46.0 3.46e-01 87.8% 65.1%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 47.0 2.85e-01 95.9% 39.3%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 49.0 4.52e-01 100.0% 86.4%
2r6fA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.57 43.0 3.80e-01 81.6% 87.5%
1xy7B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 43.0 3.32e-01 83.7% 80.3%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.57 47.0 3.61e-01 100.0% 96.2%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 3.28e-01 89.8% 45.8%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.56 43.0 3.28e-01 85.7% 73.2%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.56 45.0 3.19e-01 91.8% 58.3%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.56 40.0 3.35e-01 87.8% 42.2%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 47.0 4.57e-01 100.0% 87.3%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.54e-01 100.0% 79.9%
6fhvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 3.48e-01 87.8% 92.9%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.49e-01 100.0% 83.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.55 46.0 4.24e-01 100.0% 77.3%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.38e-01 100.0% 82.5%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.54 45.0 3.98e-01 100.0% 74.0%
3sokB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.53 41.0 3.09e-01 91.8% 39.4%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 41.0 3.16e-01 100.0% 58.4%
6l4lA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 41.0 3.05e-01 87.8% 55.1%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 43.0 3.33e-01 95.9% 82.4%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 2.91e-01 79.6% 93.3%
3g7kB02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 40.0 2.97e-01 100.0% 69.6%
5h80B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 44.0 2.83e-01 100.0% 82.5%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.52 41.0 3.40e-01 89.8% 48.4%
5icuA00 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.04e-01 79.6% 88.2%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 3.78e-01 85.7% 74.1%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.52 40.0 2.50e-01 89.8% 15.0%
3ec3A02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 43.0 3.31e-01 98.0% 93.3%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 3.67e-01 100.0% 80.3%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 2.64e-01 100.0% 41.7%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 3.91e-01 100.0% 98.3%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.50 40.0 3.70e-01 100.0% 85.9%
2jwyA01 2.60.40.1620 Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like 0.50 38.0 3.01e-01 95.9% 74.8%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3481770 4.1.1.220 beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.73 62.0 5.39e-01 100.0% 70.0%
3572647 4.1.1.227 beta barrels › SH3 › SH3 › SH3 › PWWP_KDM3B 0.73 63.0 5.22e-01 100.0% 64.4%
3687555 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.70 61.0 4.87e-01 100.0% 49.0%
4438983 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 59.0 4.83e-01 100.0% 55.8%
5024242 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.68 51.0 3.62e-01 100.0% 25.8%
3408588 4.1.1.243 beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.67 55.0 5.06e-01 100.0% 72.9%
3855974 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.67 56.0 4.97e-01 100.0% 73.3%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.67 57.0 5.28e-01 100.0% 80.0%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.35e-01 100.0% 89.7%
3794445 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 53.0 4.68e-01 100.0% 75.0%
3215500 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.22e-01 93.9% 89.1%
3588482 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 52.0 4.26e-01 89.8% 53.3%
3641570 3131.1.1.1 a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC 0.64 54.0 3.91e-01 98.0% 54.0%
3878850 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.64 51.0 4.50e-01 91.8% 66.7%
3174658 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 50.0 4.16e-01 89.8% 64.4%
4936963 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 51.0 4.35e-01 93.9% 80.0%
3503630 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 51.0 3.97e-01 93.9% 85.2%
1162188 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 45.0 3.73e-01 77.6% 96.6%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 51.0 4.60e-01 100.0% 72.0%
3332301 2485.1.1.20 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glrx-like 0.61 42.0 3.44e-01 75.5% 88.6%
4971532 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.59e-01 100.0% 78.6%
3616769 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.60 51.0 4.21e-01 100.0% 56.8%
3624498 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 3.76e-01 93.9% 49.6%
4000622 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.60 51.0 3.91e-01 100.0% 44.2%
4943273 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.63e-01 100.0% 78.5%
3505182 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 42.0 3.61e-01 87.8% 47.5%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.56e-01 100.0% 78.5%
4945344 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 3.00e-01 100.0% 34.5%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 51.0 4.78e-01 100.0% 95.0%
5036592 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.58 47.0 4.26e-01 100.0% 69.3%
3395585 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.58 44.0 4.11e-01 89.8% 66.2%
3520903 3864.1.1.0 extended segments › Mitochondrial 54S ribosomal protein L28 › Mitochondrial 54S ribosomal protein L28 › Mitochondrial 54S ribosomal protein L28 0.57 44.0 2.59e-01 89.8% 18.6%
5022489 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 49.0 2.87e-01 100.0% 24.2%
3625449 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.39e-01 93.9% 100.0%
3236367 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 46.0 3.50e-01 100.0% 89.7%
3267253 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 42.0 3.46e-01 81.6% 93.7%
3866981 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.56 44.0 3.82e-01 95.9% 88.8%
4041343 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.56 45.0 4.52e-01 95.9% 100.0%
3192955 7.1.1.19 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_CPAF_rel 0.56 44.0 3.28e-01 87.8% 76.0%
3998934 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 42.0 3.53e-01 93.9% 69.5%
4940582 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 3.08e-01 77.6% 92.2%
3408330 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 44.0 3.69e-01 100.0% 52.0%
4989279 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 45.0 3.78e-01 95.9% 90.0%
4107854 77.2.1.1 beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.55 42.0 3.30e-01 93.9% 39.0%
4000117 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.55 45.0 2.80e-01 100.0% 93.5%
5068231 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 41.0 3.63e-01 89.8% 54.7%
3970340 2.7.1.4 beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › DUF6484 0.54 38.0 2.96e-01 79.6% 49.6%
3589900 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 40.0 3.41e-01 85.7% 50.6%
3061502 10.1.1.51 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › M2AP_beta_dom 0.52 45.0 3.15e-01 100.0% 58.4%
3967494 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.51 42.0 3.36e-01 100.0% 97.4%
5043802 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 43.0 3.34e-01 100.0% 45.2%
3520870 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.50 38.0 2.43e-01 87.8% 15.4%
5004850 375.1.1.21 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.50 37.0 3.71e-01 87.8% 88.0%
D2 high residues 60-128
PDB
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yadA00 3.30.390.150 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.75 54.0 5.23e-01 81.2% 67.5%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 56.0 3.66e-01 91.3% 31.8%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.67 54.0 3.51e-01 88.4% 24.5%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 58.0 4.92e-01 100.0% 91.3%
2ghsA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 58.0 3.80e-01 100.0% 39.3%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 57.0 3.64e-01 100.0% 45.4%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.64 56.0 4.95e-01 100.0% 91.3%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.64 52.0 4.36e-01 89.9% 99.2%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 50.0 4.24e-01 89.9% 98.4%
3q6kA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 57.0 3.56e-01 100.0% 39.7%
1q7fB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 56.0 3.72e-01 100.0% 40.8%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 57.0 3.67e-01 100.0% 94.5%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 56.0 3.64e-01 100.0% 36.5%
4fffA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.62 51.0 4.01e-01 92.8% 79.7%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.62 40.0 4.31e-01 85.5% 80.7%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 55.0 3.52e-01 100.0% 44.3%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 54.0 5.03e-01 98.6% 93.1%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 42.0 4.42e-01 71.0% 79.0%
2bjfA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.62 47.0 3.02e-01 81.2% 95.9%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 50.0 4.36e-01 91.3% 64.8%
2pvaA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.61 46.0 2.96e-01 81.2% 92.4%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 54.0 3.50e-01 100.0% 37.1%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 54.0 3.29e-01 100.0% 38.8%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 54.0 3.51e-01 100.0% 37.2%
1ijqA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 53.0 3.58e-01 97.1% 36.2%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.60 53.0 3.97e-01 100.0% 66.5%
3s2kB01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 53.0 3.49e-01 100.0% 39.2%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.59 49.0 4.13e-01 98.6% 53.4%
4ci8A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 51.0 3.37e-01 100.0% 39.9%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.59 49.0 4.04e-01 98.6% 50.8%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 51.0 3.33e-01 100.0% 35.6%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.58 46.0 3.78e-01 85.5% 90.9%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 45.0 3.01e-01 82.6% 94.6%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.57 50.0 3.20e-01 100.0% 28.4%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 4.33e-01 98.6% 91.0%
1pbyB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 3.19e-01 100.0% 33.2%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.56 39.0 3.02e-01 73.9% 36.5%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.58e-01 95.7% 85.1%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.55 39.0 3.18e-01 76.8% 41.8%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 39.0 4.06e-01 75.4% 93.8%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 46.0 3.41e-01 94.2% 77.0%
5xilA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 41.0 3.42e-01 82.6% 78.1%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 4.18e-01 82.6% 92.9%
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 41.0 3.13e-01 81.2% 83.8%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.54e-01 100.0% 62.8%
4dkaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 36.0 3.41e-01 71.0% 94.2%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 3.84e-01 94.2% 84.5%
4eqsA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 3.45e-01 95.7% 84.1%
2gnxA02 3.30.450.240 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 41.0 3.53e-01 82.6% 54.1%
2hezA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.53 43.0 2.96e-01 98.6% 90.8%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 40.0 3.57e-01 84.1% 79.4%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 40.0 3.56e-01 82.6% 81.7%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 3.96e-01 84.1% 91.9%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 42.0 4.34e-01 87.0% 95.5%
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.53 43.0 2.94e-01 98.6% 95.1%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 40.0 3.32e-01 87.0% 45.0%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.73e-01 75.4% 95.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 35.0 3.39e-01 88.4% 63.7%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.50 37.0 4.00e-01 87.0% 100.0%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.50 36.0 3.07e-01 78.3% 57.0%
4hadB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 45.0 3.18e-01 97.1% 39.0%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3803938 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.70 44.0 4.34e-01 73.9% 58.7%
4030034 109.4.1.1140 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.69 49.0 2.92e-01 82.6% 10.3%
3498477 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 59.0 3.69e-01 100.0% 33.2%
4959306 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 60.0 3.80e-01 100.0% 31.3%
5043479 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 58.0 3.88e-01 100.0% 38.6%
3643744 5.1.4.122 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 0.65 56.0 3.73e-01 98.6% 50.3%
3430637 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.64 58.0 3.73e-01 100.0% 43.9%
3646226 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.64 46.0 4.37e-01 75.4% 83.7%
3579502 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.64 57.0 4.47e-01 100.0% 83.4%
3432908 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 57.0 3.63e-01 100.0% 40.0%
4028738 5.1.4.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel 0.63 48.0 3.05e-01 81.2% 21.2%
5045955 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.63 50.0 3.52e-01 85.5% 72.1%
4948153 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 46.0 4.62e-01 76.8% 77.1%
5032137 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.63 46.0 4.60e-01 76.8% 77.1%
3797457 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 56.0 3.68e-01 100.0% 38.0%
3709315 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 55.0 4.65e-01 100.0% 75.8%
4930179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 43.0 4.72e-01 88.4% 92.7%
3331569 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.62 46.0 5.08e-01 84.1% 98.2%
4027391 10.1.1.114 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29973 0.62 52.0 4.52e-01 92.8% 84.8%
3972703 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.62 50.0 4.41e-01 91.3% 89.5%
4027723 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.62 48.0 4.86e-01 87.0% 87.1%
3448363 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 55.0 3.79e-01 100.0% 57.4%
4353130 5.1.4.49 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PSII_BNR 0.61 54.0 3.48e-01 100.0% 35.2%
3281283 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.61 55.0 3.58e-01 100.0% 40.5%
3938729 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 54.0 3.58e-01 100.0% 41.1%
4238933 5.1.4.49 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PSII_BNR 0.61 52.0 3.46e-01 98.6% 43.6%
None 0.61 54.0 3.43e-01 100.0% 30.3%
3446217 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.61 52.0 3.52e-01 100.0% 49.5%
3932430 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.61 44.0 4.42e-01 76.8% 78.6%
3170424 319.1.1.19 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 0.61 43.0 3.97e-01 75.4% 71.1%
3392173 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 53.0 3.57e-01 100.0% 41.4%
3549725 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 54.0 3.31e-01 100.0% 28.5%
3460976 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.60 53.0 3.42e-01 100.0% 40.3%
3512402 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 53.0 3.43e-01 100.0% 34.2%
5028078 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.60 47.0 3.20e-01 88.4% 100.0%
3217951 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.07e-01 98.6% 58.0%
4957409 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 39.0 4.37e-01 87.0% 94.0%
3368126 5.1.5.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 0.59 48.0 3.32e-01 91.3% 84.9%
3939893 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.59 51.0 3.44e-01 97.1% 63.5%
3997105 5.1.3.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b 0.59 51.0 3.49e-01 100.0% 41.5%
3264242 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.58 52.0 3.23e-01 100.0% 22.3%
3378005 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.58 50.0 3.39e-01 100.0% 44.1%
3809547 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.58 51.0 3.25e-01 100.0% 34.6%
5056706 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 38.0 4.21e-01 88.4% 94.0%
3595735 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.13e-01 95.7% 84.9%
3788785 5.1.5.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.58 51.0 3.09e-01 100.0% 24.7%
4940485 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 50.0 4.20e-01 100.0% 83.2%
3622343 5.1.3.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF 0.58 51.0 3.53e-01 100.0% 52.1%
3547089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 41.0 3.77e-01 85.5% 57.8%
3936855 292.2.1.1 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.58 52.0 3.60e-01 100.0% 73.8%
3419193 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.57 50.0 3.61e-01 100.0% 54.3%
3759926 5.1.8.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › Kelch_1 0.57 51.0 4.05e-01 98.6% 66.7%
3190113 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.30e-01 100.0% 57.4%
3910607 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 45.0 4.72e-01 88.4% 100.0%
4958926 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 44.0 3.94e-01 89.9% 77.1%
3294906 5.1.5.86 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 0.55 48.0 3.18e-01 100.0% 45.3%
5002449 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 37.0 3.92e-01 89.9% 87.3%
3403199 331.1.1.1 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.55 42.0 3.57e-01 81.2% 79.1%
5047657 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 4.14e-01 78.3% 96.4%
3424115 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.55 48.0 3.03e-01 100.0% 40.2%
3598462 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.87e-01 100.0% 77.6%
5081796 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 46.0 3.53e-01 100.0% 83.5%
3554160 5.1.4.18 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EPTP 0.53 45.0 2.97e-01 100.0% 35.5%
3581143 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.52 40.0 4.10e-01 95.7% 87.7%
3515495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.41e-01 85.5% 55.8%
None 0.51 43.0 2.72e-01 100.0% 28.8%
3992062 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 3.07e-01 100.0% 64.8%
1308051 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.50 45.0 3.18e-01 97.1% 39.2%