←Back to structures

IMGVR_UViG_2554235483_000003-2554235483-2556122388

Arc-Vir

IMGVR_UViG_2554235483_000003-2554235483-2556122388

Identity

Kingdom:
archaea

Quality

75.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-106
PDB
Domain cluster: rep: KJ018212.1__AHK11686.1__S141_40__00040__D24-116_169-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04883.18 best HK97-gp10_like 27.9 5.00e-06 55.3% 42.3%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uiqB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 47.0 4.16e-01 75.7% 89.5%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.63 28.0 3.61e-01 83.5% 70.5%
5u4nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 48.0 3.36e-01 92.2% 86.3%
3pm6A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 49.0 3.56e-01 93.2% 89.9%
7uzqK01 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.57 49.0 3.45e-01 98.1% 72.5%
4nv0A02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.57 34.0 3.80e-01 87.4% 75.6%
4jndA02 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.56 48.0 3.59e-01 97.1% 63.7%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 48.0 4.09e-01 96.1% 73.1%
1siqA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 42.0 3.74e-01 82.5% 79.4%
5xnyA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.55 41.0 4.14e-01 90.3% 77.6%
2gsvA00 6.10.140.40 Special › Helix non-globular › Helix Hairpins › 0.55 32.0 3.79e-01 98.1% 88.1%
4i4cB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 43.0 2.90e-01 84.5% 25.6%
8sbeA01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.53 41.0 3.38e-01 82.5% 86.2%
3f0cA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 44.0 3.93e-01 89.3% 92.4%
1dqeA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 40.0 3.68e-01 99.0% 61.3%
1blwC00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 38.0 3.44e-01 76.7% 94.3%
3fnbA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.51 35.0 3.45e-01 100.0% 64.0%
6adqG01 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.51 36.0 3.00e-01 73.8% 80.9%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4132296 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.67 30.0 3.93e-01 84.5% 75.0%
3822747 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 50.0 5.06e-01 82.5% 99.0%
4995712 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.65 44.0 4.58e-01 76.7% 75.8%
3994623 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 50.0 4.93e-01 84.5% 100.0%
3233029 3711.1.1.24 ↗ alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF4473 0.58 43.0 4.64e-01 99.0% 94.1%
3513623 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.58 41.0 3.57e-01 74.8% 85.5%
4369880 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 47.0 4.84e-01 99.0% 99.0%
3413935 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.53 30.0 3.21e-01 84.5% 62.2%
5050325 4333.1.1.0 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain 0.52 43.0 3.21e-01 92.2% 74.0%
4927047 632.19.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.52 34.0 3.83e-01 86.4% 93.3%
3620551 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.19e-01 70.9% 95.3%
5005533 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.51 36.0 3.21e-01 72.8% 74.0%
4420076 632.2.1.35 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF4972 0.51 36.0 3.87e-01 71.8% 98.8%
3407685 5038.2.1.1 ↗ alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG 0.50 38.0 3.58e-01 83.5% 77.8%