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IMGVR_UViG_2554235495_000004-2554235495-2556165223

Arc-Vir

IMGVR_UViG_2554235495_000004-2554235495-2556165223

Identity

Kingdom:
archaea

Quality

73.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-61
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8e9gK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 48.0 4.24e-01 92.7% 82.4%
2y2zA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 44.0 3.27e-01 81.8% 34.0%
2bkkC02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.56 47.0 3.37e-01 98.2% 86.7%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 44.0 3.36e-01 92.7% 92.6%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.52 34.0 3.06e-01 70.9% 77.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4050308 109.4.1.158 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERAP1_C 0.72 51.0 3.16e-01 74.5% 31.4%
5012496 3843.1.1.1 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 0.70 53.0 4.65e-01 87.3% 92.2%
5049307 109.4.1.371 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 0.57 47.0 3.12e-01 90.9% 50.0%
4012827 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 46.0 2.79e-01 98.2% 15.8%