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IMGVR_UViG_2554235495_000005-2554235495-2556168286
Arc-VirIMGVR_UViG_2554235495_000005-2554235495-2556168286
Identity
- Kingdom:
- archaea
Quality
78.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-119
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.62 | 43.0 | 3.66e-01 | 71.9% | 43.6% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 33.0 | 2.90e-01 | 88.5% | 36.2% |
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.58 | 30.0 | 3.19e-01 | 96.9% | 53.5% |
| 1x6cA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 36.0 | 3.41e-01 | 88.5% | 52.5% |
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.56 | 43.0 | 3.52e-01 | 83.3% | 69.3% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 29.0 | 2.89e-01 | 78.1% | 44.7% |
| 1p5tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 41.0 | 4.02e-01 | 100.0% | 80.2% |
| 1rxtC02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 38.0 | 3.09e-01 | 81.2% | 56.5% |
| 3l50A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 36.0 | 3.24e-01 | 75.0% | 55.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937350 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 29.0 | 3.40e-01 | 76.0% | 70.8% |
| 3591845 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 45.0 | 3.10e-01 | 92.7% | 95.6% |
| 4039776 | 243.3.1.48 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › GlfB_C | 0.55 | 41.0 | 3.46e-01 | 78.1% | 48.1% |
| 3728191 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 33.0 | 2.70e-01 | 87.5% | 31.5% |
| 4942717 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.53 | 47.0 | 3.67e-01 | 100.0% | 84.7% |
| None | — | 0.53 | 44.0 | 2.60e-01 | 96.9% | 41.6% | |
| 4988402 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.52 | 27.0 | 2.94e-01 | 81.2% | 58.7% |
| 4012707 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.52 | 38.0 | 3.32e-01 | 78.1% | 76.5% |
| 3290706 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 29.0 | 3.33e-01 | 77.1% | 82.5% |
| 3185173 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.50 | 43.0 | 2.92e-01 | 100.0% | 76.0% |