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IMGVR_UViG_2554235495_000005-2554235495-2556168313
Arc-VirIMGVR_UViG_2554235495_000005-2554235495-2556168313
Identity
- Kingdom:
- archaea
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-91
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jpnB04 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 52.0 | 4.60e-01 | 85.4% | 54.5% |
| 4ohvA01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.70 | 51.0 | 5.33e-01 | 86.5% | 83.7% |
| 1e5bA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 49.0 | 5.01e-01 | 74.2% | 80.5% |
| 1pmiA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 47.0 | 4.27e-01 | 73.0% | 63.0% |
| 1dglA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 52.0 | 3.84e-01 | 89.9% | 59.1% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 43.0 | 3.64e-01 | 73.0% | 68.6% |
| 1fxzA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 50.0 | 4.13e-01 | 88.8% | 70.1% |
| 2cwrA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 51.0 | 4.97e-01 | 100.0% | 82.5% |
| 2xu9A03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.61 | 50.0 | 4.45e-01 | 96.6% | 61.7% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 48.0 | 3.94e-01 | 85.4% | 61.2% |
| 1nqjB00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 44.0 | 4.07e-01 | 84.3% | 59.6% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 52.0 | 4.51e-01 | 97.8% | 81.5% |
| 1iamA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 4.25e-01 | 96.6% | 74.7% |
| 1yllA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 42.0 | 4.25e-01 | 74.2% | 71.7% |
| 2vqaC01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 48.0 | 3.90e-01 | 88.8% | 62.7% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 53.0 | 4.18e-01 | 100.0% | 84.2% |
| 6z0jA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.60 | 51.0 | 4.61e-01 | 96.6% | 69.4% |
| 2ii7H00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.59 | 47.0 | 4.45e-01 | 85.4% | 70.8% |
| 1cauA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 47.0 | 3.78e-01 | 87.6% | 68.0% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 47.0 | 3.35e-01 | 85.4% | 42.7% |
| 3kmhA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 46.0 | 3.55e-01 | 86.5% | 37.6% |
| 4cucA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 51.0 | 4.67e-01 | 96.6% | 77.6% |
| 6qe7A01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.59 | 48.0 | 4.21e-01 | 91.0% | 67.6% |
| 1pf3A03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.58 | 50.0 | 4.22e-01 | 96.6% | 56.4% |
| 3ndzE00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 4.56e-01 | 91.0% | 85.0% |
| 2nykA02 | 2.60.40.2530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 44.0 | 4.48e-01 | 98.9% | 82.8% |
| 6qdiA02 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.58 | 47.0 | 4.17e-01 | 91.0% | 67.2% |
| 3gm8A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 50.0 | 4.69e-01 | 96.6% | 77.3% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 41.0 | 3.88e-01 | 74.2% | 62.4% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.58 | 46.0 | 3.92e-01 | 85.4% | 62.4% |
| 2rttA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 4.71e-01 | 96.6% | 83.8% |
| 3q9oA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 46.0 | 3.45e-01 | 85.4% | 61.6% |
| 4qgnA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 43.0 | 3.50e-01 | 82.0% | 43.8% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.57 | 45.0 | 4.01e-01 | 88.8% | 95.6% |
| 1c7sA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 4.16e-01 | 96.6% | 88.7% |
| 2cnzA00 | 2.60.40.1570 | Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin | 0.56 | 40.0 | 3.60e-01 | 74.2% | 80.5% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.02e-01 | 96.6% | 73.4% |
| 1xsqA00 | 2.60.120.480 | Mainly Beta › Sandwich › Jelly Rolls › Ureidoglycolate hydrolase | 0.55 | 41.0 | 3.49e-01 | 79.8% | 55.6% |
| 4qglA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 43.0 | 3.54e-01 | 88.8% | 45.4% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 48.0 | 4.49e-01 | 100.0% | 80.2% |
| 4cp2A00 | 2.60.120.1560 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 3.59e-01 | 98.9% | 45.2% |
| 2o1qA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 4.06e-01 | 95.5% | 67.7% |
| 1nxmA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 47.0 | 3.72e-01 | 100.0% | 62.4% |
| 7mjrA01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.53 | 45.0 | 3.44e-01 | 95.5% | 85.2% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.52 | 45.0 | 4.20e-01 | 100.0% | 86.2% |
| 2lw3A00 | 2.60.40.2880 | Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain | 0.52 | 41.0 | 4.17e-01 | 100.0% | 88.9% |
| 4liqE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 4.16e-01 | 88.8% | 97.4% |
| 4k4kA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.77e-01 | 94.4% | 95.3% |
| 6lsvA01 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.50 | 42.0 | 2.90e-01 | 94.4% | 76.6% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4962000 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.88 | 70.0 | 7.43e-01 | 85.4% | 92.5% |
| 4961999 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.87 | 74.0 | 7.86e-01 | 95.5% | 100.0% |
| 4961997 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.87 | 77.0 | 7.75e-01 | 96.6% | 93.3% |
| 3705936 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.77 | 55.0 | 4.88e-01 | 74.2% | 57.6% |
| 3593194 | 10.15.1.0 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like | 0.77 | 55.0 | 4.94e-01 | 74.2% | 58.8% |
| 3593621 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.77 | 55.0 | 4.91e-01 | 74.2% | 60.0% |
| 3593037 | 10.15.1.0 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like | 0.76 | 54.0 | 4.97e-01 | 74.2% | 61.7% |
| 3214126 | 864.1.1.5 ↗ | a+b two layers › DLC › DLC › DLC › DUF684 | 0.71 | 49.0 | 4.12e-01 | 73.0% | 63.9% |
| 1296378 | 10.34.1.1 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain › CLP1_N | 0.70 | 51.0 | 5.33e-01 | 86.5% | 83.7% |
| 4679947 | 10.34.1.1 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain › CLP1_N | 0.70 | 50.0 | 5.22e-01 | 86.5% | 83.7% |
| 3825961 | 10.34.1.1 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain › CLP1_N | 0.69 | 50.0 | 5.22e-01 | 86.5% | 83.7% |
| 1873956 | 10.1.1.7 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_11 | 0.68 | 58.0 | 4.61e-01 | 95.5% | 66.5% |
| 4172901 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 48.0 | 4.42e-01 | 74.2% | 77.4% |
| 4079760 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.67 | 48.0 | 4.79e-01 | 74.2% | 77.8% |
| 3598703 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 53.0 | 4.57e-01 | 87.6% | 89.7% |
| 3999001 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.65 | 52.0 | 4.92e-01 | 85.4% | 81.0% |
| 3320826 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.64 | 50.0 | 4.06e-01 | 85.4% | 63.9% |
| 3363402 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 50.0 | 4.24e-01 | 85.4% | 74.2% |
| 3261600 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 44.0 | 4.75e-01 | 95.5% | 86.5% |
| 5083735 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 50.0 | 4.44e-01 | 86.5% | 77.8% |
| 3223402 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 51.0 | 4.96e-01 | 85.4% | 98.0% |
| 4927104 | 10.1.2.193 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Thioredoxin_10 | 0.63 | 50.0 | 4.15e-01 | 85.4% | 53.5% |
| 154416 | 10.32.1.19 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC | 0.62 | 44.0 | 4.12e-01 | 74.2% | 67.3% |
| 5022901 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 46.0 | 4.10e-01 | 93.3% | 55.5% |
| 302818 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.61 | 50.0 | 4.81e-01 | 100.0% | 77.7% |
| 3601261 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 47.0 | 3.76e-01 | 86.5% | 99.5% |
| 3609473 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.61 | 53.0 | 4.41e-01 | 96.6% | 63.2% |
| 3922479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 53.0 | 4.84e-01 | 97.8% | 74.2% |
| 3524750 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 52.0 | 4.59e-01 | 96.6% | 65.9% |
| 5055042 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 44.0 | 4.33e-01 | 77.5% | 85.3% |
| 976738 | 10.12.1.4 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › dTDP_sugar_isom | 0.60 | 48.0 | 3.78e-01 | 88.8% | 56.0% |
| 3615400 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 49.0 | 3.90e-01 | 89.9% | 50.3% |
| 2721678 | 3156.1.1.8 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 | 0.60 | 51.0 | 4.33e-01 | 96.6% | 56.0% |
| 3187961 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.59 | 50.0 | 4.56e-01 | 96.6% | 80.0% |
| 3978902 | 3156.1.1.8 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 | 0.58 | 50.0 | 3.86e-01 | 96.6% | 42.0% |
| 134243 | 11.1.1.273 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro2_C5 | 0.58 | 50.0 | 4.66e-01 | 96.6% | 75.9% |
| 4657391 | 11.1.1.1264 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27334 | 0.58 | 50.0 | 4.54e-01 | 96.6% | 77.5% |
| 3244516 | 10.12.1.15 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ARD | 0.58 | 43.0 | 3.53e-01 | 80.9% | 44.9% |
| 5022898 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.58 | 46.0 | 4.74e-01 | 88.8% | 94.1% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.57 | 46.0 | 3.67e-01 | 87.6% | 79.9% |
| 3817340 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.57 | 41.0 | 2.99e-01 | 77.5% | 31.3% |
| 3945331 | 10.12.1.40 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 | 0.56 | 40.0 | 2.91e-01 | 75.3% | 31.5% |
| 3743669 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 48.0 | 4.07e-01 | 96.6% | 72.3% |
| 3577792 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.56 | 48.0 | 4.44e-01 | 98.9% | 83.3% |
| 3690144 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 4.38e-01 | 96.6% | 85.2% |
| 3896872 | 3529.1.1.1 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault | 0.54 | 35.0 | 3.87e-01 | 86.5% | 84.3% |
| 3460312 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 46.0 | 3.68e-01 | 95.5% | 61.7% |
| 3421900 | 10.2.1.83 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › GUB_WAK_bind | 0.53 | 46.0 | 3.47e-01 | 95.5% | 54.9% |
| 4970754 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.53 | 37.0 | 3.36e-01 | 71.9% | 85.8% |
| 3289166 | 10.20.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N | 0.53 | 41.0 | 3.79e-01 | 85.4% | 95.0% |
| 3597814 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.52 | 46.0 | 3.92e-01 | 98.9% | 68.0% |
| 3668002 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 43.0 | 3.46e-01 | 91.0% | 66.1% |
| 5021820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 3.43e-01 | 98.9% | 77.7% |
| 3523713 | 10.4.1.22 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_CDCP1_2 | 0.51 | 40.0 | 3.62e-01 | 85.4% | 61.6% |
| 3266725 | 10.12.1.51 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2 | 0.51 | 39.0 | 3.06e-01 | 85.4% | 76.7% |
| 3453467 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 43.0 | 3.64e-01 | 100.0% | 85.6% |
D2
medium
residues 115-330
Domain cluster:
rep: IMGVR_UViG_3300048114_000317-3300048114-Ga0494428_0000031_46037_47047__D55-281
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 71.0 | 5.63e-01 | 94.9% | 86.6% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 69.0 | 5.65e-01 | 92.1% | 81.9% |
| 4pmhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 69.0 | 5.67e-01 | 94.9% | 90.2% |
| 1jtaA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 5.88e-01 | 100.0% | 94.5% |
| 1dbgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 64.0 | 4.84e-01 | 89.8% | 88.8% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 70.0 | 6.19e-01 | 99.5% | 93.6% |
| 7dmkA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 62.0 | 5.51e-01 | 90.3% | 87.3% |
| 7o79A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 62.0 | 5.01e-01 | 90.3% | 67.6% |
| 7o7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 62.0 | 4.99e-01 | 90.7% | 66.8% |
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 66.0 | 5.60e-01 | 100.0% | 94.2% |
| 3vmvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 63.0 | 5.43e-01 | 95.4% | 91.7% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 60.0 | 5.91e-01 | 90.3% | 100.0% |
| 5gkqB01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 61.0 | 4.98e-01 | 96.3% | 73.2% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 62.0 | 5.35e-01 | 97.2% | 91.5% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 62.0 | 4.70e-01 | 97.7% | 69.2% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 63.0 | 5.12e-01 | 100.0% | 83.0% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 48.0 | 5.04e-01 | 87.5% | 80.3% |
| 1ogoX02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 61.0 | 5.07e-01 | 98.6% | 82.6% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.64 | 45.0 | 5.27e-01 | 80.6% | 98.7% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.64 | 59.0 | 4.43e-01 | 98.1% | 51.0% |
| 5o8zB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 32.0 | 3.84e-01 | 94.0% | 94.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937200 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.78 | 53.0 | 6.38e-01 | 75.0% | 100.0% |
| 3256108 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.77 | 67.0 | 6.16e-01 | 90.3% | 96.7% |
| 4980606 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 56.0 | 6.31e-01 | 75.5% | 100.0% |
| 4023937 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.73 | 46.0 | 5.73e-01 | 81.5% | 100.0% |
| 4981827 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 67.0 | 6.84e-01 | 95.4% | 98.1% |
| 3705677 | 207.2.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 62.0 | 4.67e-01 | 92.1% | 56.4% |
| 5018668 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.71 | 63.0 | 5.35e-01 | 92.6% | 69.0% |
| 4029787 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.71 | 52.0 | 5.15e-01 | 89.8% | 70.4% |
| 1758793 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 63.0 | 6.11e-01 | 97.2% | 84.0% |
| 185219 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.70 | 60.0 | 4.94e-01 | 90.3% | 70.2% |
| 3751429 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 66.0 | 5.95e-01 | 99.5% | 88.6% |
| 3267433 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 60.0 | 5.49e-01 | 92.1% | 85.7% |
| 4972664 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 58.0 | 5.21e-01 | 90.7% | 83.1% |
| 4982197 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.64 | 60.0 | 4.89e-01 | 100.0% | 69.4% |
| 3924262 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.60 | 49.0 | 4.92e-01 | 87.5% | 83.2% |