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IMGVR_UViG_2554235497_000003-2554235497-2556172802

Arc-Vir

Identity

Accession:: IMGVR_UViG_2554235497_000003-2554235497-2556172802 ↗
Kingdom:: archaea

Quality

85.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-138

PDB

Domain cluster: rep: JF974305__AGF91200.1__HAPG-00014__00014__D19-180

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6yttA01	1.10.8.190	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1	0.58	33.0	3.60e-01	71.4%	67.0%
4gx0A01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.53	30.0	3.36e-01	100.0%	69.9%
1ylmA00	1.20.120.580	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like	0.52	41.0	3.99e-01	84.9%	98.6%
6mcjA00	1.10.2090.10	Mainly Alpha › Orthogonal Bundle › orange carotenoid protein, domain 2 › Orange carotenoid-binding protein, N-terminal domain	0.52	39.0	3.79e-01	81.0%	93.1%
2xheA03	3.90.830.10	Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a	0.52	38.0	3.95e-01	100.0%	81.0%
2p9xA00	1.10.1200.200	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227	0.51	35.0	3.87e-01	84.1%	89.8%
3shgA00	1.10.3290.10	Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain	0.51	37.0	3.28e-01	77.8%	72.2%
2vl7A02	1.10.275.30	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 ›	0.50	36.0	3.83e-01	80.2%	85.5%
3iqtA01	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.50	41.0	4.28e-01	88.9%	98.2%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3586672	6050.1.1.0 ↗	a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone	0.65	45.0	4.91e-01	98.4%	84.8%
2114571	5037.1.1.2 ↗	alpha bundles › Bacterial photosystem II reaction centre L and M subunits-like › Bacterial photosystem II reaction centre L and M subunits-like › Bacterial photosystem II reaction centre L and M subunits-like › PsaA_PsaB	0.59	36.0	2.73e-01	76.2%	26.0%
2697492	4044.1.1.2 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › CODH_A_N	0.58	33.0	3.55e-01	71.4%	63.2%
4973854	4044.1.1.0 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins	0.56	33.0	3.56e-01	76.2%	67.6%
3613320	605.3.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Nonstructural protein ns2, Nep, M1-binding domain › Nonstructural protein ns2, Nep, M1-binding domain	0.55	32.0	3.65e-01	72.2%	77.8%
3245293	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.54	41.0	3.41e-01	100.0%	46.0%
4883379	601.3.1.1 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt	0.54	43.0	4.04e-01	85.7%	81.7%
3411458	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.50	32.0	3.33e-01	79.4%	68.7%
3194286	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.50	40.0	2.92e-01	85.7%	50.0%