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IMGVR_UViG_2554235504_000004-2554235504-2556200036
Arc-VirIMGVR_UViG_2554235504_000004-2554235504-2556200036
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-124
Domain cluster:
rep: IMGVR_UViG_2791355072_000002-2791355072-2792541819__D47-123
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.63 | 49.0 | 5.21e-01 | 87.5% | 96.6% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 39.0 | 4.46e-01 | 83.7% | 85.5% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.59 | 47.0 | 4.99e-01 | 100.0% | 100.0% |
| 1kxlA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 3.73e-01 | 100.0% | 47.1% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.56 | 42.0 | 3.07e-01 | 78.8% | 95.3% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.56 | 43.0 | 3.71e-01 | 82.7% | 86.0% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 4.06e-01 | 82.7% | 89.9% |
| 3ci0K01 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.54 | 41.0 | 4.16e-01 | 79.8% | 96.2% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 47.0 | 3.25e-01 | 98.1% | 27.6% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 36.0 | 3.55e-01 | 70.2% | 87.2% |
| 4ew7A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 4.07e-01 | 95.2% | 78.8% |
| 4irzA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.52 | 44.0 | 2.94e-01 | 93.3% | 38.8% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.52 | 36.0 | 3.27e-01 | 72.1% | 98.6% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.67e-01 | 84.6% | 61.0% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.52 | 42.0 | 3.64e-01 | 90.4% | 87.0% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.72e-01 | 84.6% | 76.5% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 39.0 | 3.37e-01 | 84.6% | 80.8% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 25.0 | 3.25e-01 | 84.6% | 83.3% |
| 3g16B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.52e-01 | 84.6% | 61.8% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.50 | 33.0 | 3.55e-01 | 82.7% | 78.7% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.50 | 35.0 | 3.61e-01 | 98.1% | 77.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993827 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.67 | 45.0 | 5.06e-01 | 83.7% | 90.0% |
| 5071733 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.66 | 50.0 | 5.29e-01 | 91.3% | 93.3% |
| 4096980 | 243.5.1.6 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cyto_heme_lyase | 0.61 | 48.0 | 4.50e-01 | 84.6% | 73.1% |
| 3905709 | 243.3.1.22 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cyto_heme_lyase | 0.61 | 48.0 | 4.04e-01 | 84.6% | 51.1% |
| 5061264 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.60 | 42.0 | 4.67e-01 | 82.7% | 96.2% |
| 3937921 | 5.1.3.170 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd | 0.58 | 43.0 | 2.99e-01 | 93.3% | 23.9% |
| 4419139 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.58 | 42.0 | 3.78e-01 | 84.6% | 53.8% |
| 4504902 | 3222.1.1.1 ↗ | a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory | 0.58 | 52.0 | 3.66e-01 | 98.1% | 34.9% |
| 5082652 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.57 | 31.0 | 2.97e-01 | 70.2% | 43.2% |
| 3920557 | 4210.1.1.3 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › PF26166 | 0.57 | 42.0 | 4.38e-01 | 86.5% | 84.2% |
| 5036898 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 40.0 | 3.60e-01 | 93.3% | 51.4% |
| 3190371 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 44.0 | 4.11e-01 | 82.7% | 94.6% |
| 3183597 | 5.1.4.80 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller | 0.55 | 49.0 | 3.24e-01 | 99.0% | 32.4% |
| 4944475 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.55 | 38.0 | 4.09e-01 | 82.7% | 83.3% |
| 5078190 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.55 | 42.0 | 3.15e-01 | 86.5% | 31.7% |
| 3288112 | 243.1.1.69 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6459 | 0.55 | 43.0 | 4.26e-01 | 82.7% | 91.7% |
| 3955407 | 243.1.1.69 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6459 | 0.54 | 42.0 | 4.06e-01 | 82.7% | 89.8% |
| 4050475 | 331.9.1.1 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C | 0.52 | 37.0 | 3.52e-01 | 73.1% | 64.2% |
| 5034706 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 36.0 | 4.03e-01 | 76.0% | 97.3% |
| 4858776 | 243.1.1.8 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC | 0.52 | 41.0 | 3.43e-01 | 85.6% | 78.9% |
| 3246578 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 45.0 | 3.01e-01 | 97.1% | 29.5% |
| 3928508 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.50 | 41.0 | 2.88e-01 | 96.2% | 26.2% |
| 3492201 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.50 | 29.0 | 3.38e-01 | 72.1% | 78.7% |
| 3596002 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.50 | 39.0 | 3.64e-01 | 83.7% | 86.9% |