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IMGVR_UViG_2554235504_000004-2554235504-2556200088
Arc-VirIMGVR_UViG_2554235504_000004-2554235504-2556200088
Identity
- Kingdom:
- archaea
Quality
58.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-97
D2
medium
residues 98-162
Domain cluster:
rep: NC_021330__YP_008059689.1__M202-gp092__00127__D294-357
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ynjD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 37.0 | 4.08e-01 | 70.8% | 81.1% |
| 4p72A03 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.52 | 41.0 | 2.99e-01 | 90.8% | 79.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3301393 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.58 | 48.0 | 2.94e-01 | 98.5% | 90.0% |
| 3512963 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 44.0 | 2.75e-01 | 89.2% | 14.7% |
| 5005106 | 325.1.8.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N | 0.55 | 37.0 | 3.87e-01 | 72.3% | 100.0% |
| 993431 | 3264.1.1.0 ↗ | 0.54 | 36.0 | 2.69e-01 | 76.9% | 28.2% | |
| 3241447 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 36.0 | 2.96e-01 | 84.6% | 38.3% |
| 3505220 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.50 | 38.0 | 3.05e-01 | 86.2% | 80.6% |
D3
medium
residues 312-366