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IMGVR_UViG_2582580504_000002-2582580504-2582595750

Arc-Vir

Identity

Accession:: IMGVR_UViG_2582580504_000002-2582580504-2582595750 ↗
Kingdom:: archaea

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-63

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1o0sA02	1.20.1370.30	Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain ›	0.73	58.0	4.49e-01	82.1%	50.0%
3vkgB03	1.20.58.1120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4	0.66	50.0	3.61e-01	82.1%	50.6%
3pvuA02	1.10.167.10	Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2	0.66	49.0	4.41e-01	82.1%	72.5%
3amiA02	3.30.830.10	Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like	0.59	45.0	3.11e-01	83.9%	77.9%
2vx2G02	1.10.12.10	Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2	0.59	46.0	4.67e-01	92.9%	85.5%
4fd5A00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.58	42.0	2.88e-01	78.6%	52.3%
2l1lB00	1.20.1440.250	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.58	51.0	3.94e-01	100.0%	91.3%
1kz7A01	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.55	41.0	2.86e-01	82.1%	51.8%
4jfcA02	1.10.12.10	Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2	0.55	43.0	4.37e-01	89.3%	85.7%
3a8pA02	6.10.140.680	Special › Helix non-globular › Helix Hairpins ›	0.52	42.0	3.52e-01	100.0%	84.2%
2xi5A00	3.40.91.60	Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease ›	0.51	43.0	3.06e-01	98.2%	54.9%
1k3kA00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.51	38.0	2.89e-01	82.1%	42.5%
4z4qA04	1.10.268.10	Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3	0.50	41.0	3.56e-01	92.9%	73.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3408346	633.24.1.2 ↗	alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601	0.74	56.0	5.10e-01	82.1%	84.0%
4949870	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.68	53.0	3.58e-01	85.7%	55.8%
4460385	4095.1.1.1 ↗	alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N	0.66	53.0	4.22e-01	85.7%	54.3%
1575638	4048.1.1.1 ↗	alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel	0.64	56.0	4.63e-01	94.6%	57.4%
3230723	548.1.1.0 ↗	alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain	0.64	43.0	4.60e-01	73.2%	88.9%
4988092	601.29.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like	0.58	42.0	3.79e-01	82.1%	89.4%
3599922	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.52	43.0	2.71e-01	100.0%	33.1%
3895470	3826.1.1.0 ↗	alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR)	0.51	40.0	3.41e-01	87.5%	52.6%