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IMGVR_UViG_2582580505_000001-2582580505-2582597908
Arc-VirIMGVR_UViG_2582580505_000001-2582580505-2582597908
Identity
- Kingdom:
- archaea
Quality
40.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-84
D2
medium
residues 144-197
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nldB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 62.0 | 4.66e-01 | 100.0% | 46.4% |
| 2f2hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 59.0 | 4.74e-01 | 100.0% | 81.7% |
| 6v55A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 56.0 | 3.88e-01 | 100.0% | 30.3% |
| 3ib5A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.65 | 53.0 | 3.28e-01 | 94.4% | 24.6% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.64 | 54.0 | 4.24e-01 | 94.4% | 83.5% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.64 | 47.0 | 3.45e-01 | 79.6% | 57.9% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 47.0 | 3.27e-01 | 92.6% | 24.2% |
| 2x3hA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 49.0 | 2.83e-01 | 88.9% | 10.6% |
| 4hpqB00 | 2.60.270.60 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 | 0.57 | 38.0 | 3.08e-01 | 70.4% | 37.4% |
| 4r9iA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.55 | 38.0 | 2.47e-01 | 75.9% | 99.3% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 48.0 | 3.35e-01 | 100.0% | 32.8% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 47.0 | 3.53e-01 | 100.0% | 48.9% |
| 3gmvX00 | 3.10.450.730 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain | 0.54 | 44.0 | 3.31e-01 | 100.0% | 59.0% |
| 1iicA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 40.0 | 2.70e-01 | 85.2% | 79.4% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 46.0 | 3.71e-01 | 100.0% | 59.6% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.52 | 44.0 | 3.58e-01 | 100.0% | 75.9% |
| 3tthB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 2.87e-01 | 88.9% | 73.8% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 2.85e-01 | 88.9% | 74.1% |
| 2ft0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 39.0 | 2.63e-01 | 85.2% | 52.3% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.50 | 37.0 | 3.29e-01 | 83.3% | 79.1% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937307 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.91 | 81.0 | 5.37e-01 | 100.0% | 27.4% |
| 3623296 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.77 | 68.0 | 4.78e-01 | 100.0% | 32.9% |
| 4002267 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.75 | 67.0 | 4.75e-01 | 100.0% | 36.9% |
| 3559319 | 101.1.11.134 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Sarcoglycan_1 | 0.73 | 48.0 | 4.63e-01 | 70.4% | 60.0% |
| 3950877 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.72 | 54.0 | 5.14e-01 | 83.3% | 87.7% |
| 3995842 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.70 | 58.0 | 4.01e-01 | 94.4% | 27.3% |
| 3767876 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.69 | 48.0 | 3.52e-01 | 72.2% | 36.6% |
| 2038 | 4178.1.1.4 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › PF29281 | 0.68 | 59.0 | 4.76e-01 | 100.0% | 82.4% |
| 4942517 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.68 | 54.0 | 4.05e-01 | 90.7% | 96.6% |
| 3247905 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.68 | 46.0 | 3.08e-01 | 72.2% | 36.4% |
| 3411216 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.67 | 48.0 | 3.91e-01 | 75.9% | 45.0% |
| 3972141 | 881.1.1.25 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF4946 | 0.66 | 46.0 | 3.31e-01 | 72.2% | 84.5% |
| 4499276 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.64 | 49.0 | 4.31e-01 | 83.3% | 77.5% |
| 4465258 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.63 | 48.0 | 3.98e-01 | 83.3% | 63.0% |
| 3574066 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.63 | 51.0 | 3.51e-01 | 90.7% | 29.3% |
| 3734369 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.62 | 46.0 | 2.92e-01 | 83.3% | 20.3% |
| 3932040 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.61 | 51.0 | 4.51e-01 | 92.6% | 80.0% |
| 3656902 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.61 | 50.0 | 4.18e-01 | 100.0% | 97.2% |
| 3251263 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.60 | 46.0 | 2.87e-01 | 90.7% | 51.5% |
| 3583042 | 79.1.1.18 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 | 0.59 | 49.0 | 3.62e-01 | 92.6% | 45.7% |
| 3511356 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.58 | 43.0 | 3.47e-01 | 79.6% | 79.0% |
| 3282187 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.58 | 39.0 | 3.04e-01 | 70.4% | 46.4% |
| 4011234 | 4291.1.1.0 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein | 0.57 | 43.0 | 2.70e-01 | 90.7% | 48.0% |
| 4962744 | 2.1.1.370 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6663 | 0.56 | 40.0 | 2.74e-01 | 77.8% | 44.4% |
| 4067273 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.56 | 47.0 | 3.39e-01 | 98.1% | 36.4% |
| 3607434 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 42.0 | 3.39e-01 | 94.4% | 53.3% |
| 4387761 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 46.0 | 3.30e-01 | 98.1% | 33.9% |
| 4347651 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.54 | 45.0 | 3.20e-01 | 98.1% | 30.3% |
| 4148988 | 213.1.1.91 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NMT, NMT_C | 0.54 | 41.0 | 2.43e-01 | 85.2% | 33.4% |
| 4197307 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.53 | 46.0 | 3.29e-01 | 100.0% | 35.8% |
| 4363703 | 213.1.1.9 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NMT_C | 0.53 | 40.0 | 2.73e-01 | 85.2% | 82.5% |
| 4917097 | 10.1.1.79 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › RYDR_Jsol | 0.53 | 41.0 | 2.79e-01 | 94.4% | 44.1% |
| 4498332 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.53 | 40.0 | 2.89e-01 | 88.9% | 27.9% |
| 3469465 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.52 | 37.0 | 2.16e-01 | 83.3% | 16.7% |
| 4555719 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.51 | 37.0 | 2.85e-01 | 81.5% | 87.1% |