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IMGVR_UViG_2600255154_000001-2600255154-2601102932
Arc-VirIMGVR_UViG_2600255154_000001-2600255154-2601102932
Identity
- Kingdom:
- archaea
Quality
60.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 286-410
D2
medium
residues 122-179
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j8uA00 | 1.10.800.10 | Mainly Alpha › Orthogonal Bundle › Phenylalanine Hydroxylase › Aromatic amino acid hydroxylase | 0.56 | 45.0 | 2.95e-01 | 96.6% | 84.7% |
| 2q07A02 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.53 | 34.0 | 3.38e-01 | 94.8% | 58.5% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 39.0 | 2.58e-01 | 81.0% | 20.8% |
| 2w00A05 | 1.20.58.2040 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 38.0 | 3.23e-01 | 77.6% | 69.3% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 35.0 | 2.90e-01 | 70.7% | 77.7% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 37.0 | 2.99e-01 | 77.6% | 66.7% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 35.0 | 2.98e-01 | 87.9% | 40.6% |
| 2eqpA00 | 4.10.400.20 | Few Secondary Structures › Irregular › Low-density Lipoprotein Receptor › | 0.51 | 27.0 | 2.89e-01 | 86.2% | 52.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3371797 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.61 | 33.0 | 2.85e-01 | 70.7% | 32.2% |
| 3406180 | 501.1.1.0 ↗ | few secondary structure elements › Heparin-binding domain from vascular endothelial growth factor › Heparin-binding domain from vascular endothelial growth factor › Heparin-binding domain from vascular endothelial growth factor | 0.59 | 35.0 | 3.42e-01 | 96.6% | 51.6% |
| 4028911 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 42.0 | 3.36e-01 | 84.5% | 66.9% |
| 3394655 | 603.1.1.104 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 | 0.56 | 41.0 | 2.64e-01 | 84.5% | 66.4% |
| 3445259 | 2002.1.1.12 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_1 | 0.54 | 37.0 | 2.49e-01 | 72.4% | 20.4% |
| 3169362 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 43.0 | 2.56e-01 | 93.1% | 15.9% |
| 3595144 | 5073.1.1.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M | 0.53 | 43.0 | 2.55e-01 | 91.4% | 67.4% |
| 4515794 | 375.1.1.11 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27 | 0.52 | 36.0 | 3.68e-01 | 72.4% | 90.9% |
| 3903212 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 39.0 | 3.87e-01 | 98.3% | 83.3% |
| 3373308 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.51 | 36.0 | 3.49e-01 | 84.5% | 67.7% |
| 4649506 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.50 | 39.0 | 2.53e-01 | 91.4% | 27.0% |
D3
medium
residues 186-243